Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1770

Experiment: Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%
1,832,779	+	hydA	DVU1769	0.23	-0.0
1,832,788	-	hydA	DVU1769	0.24	+0.8
1,832,822	-	hydA	DVU1769	0.27	-0.0
1,832,845	+	hydA	DVU1769	0.29	-2.7
1,832,961	-	hydA	DVU1769	0.38	-2.8
1,833,017	-	hydA	DVU1769	0.42	-0.1
1,833,021	-	hydA	DVU1769	0.42	-0.1
1,833,046	-	hydA	DVU1769	0.44	-0.4
1,833,051	+	hydA	DVU1769	0.45	-0.6
1,833,144	-	hydA	DVU1769	0.52	+0.3
1,833,155	-	hydA	DVU1769	0.53	+0.2
1,833,157	+	hydA	DVU1769	0.53	-0.4
1,833,157	+	hydA	DVU1769	0.53	-0.7
1,833,157	+	hydA	DVU1769	0.53	-0.1
1,833,157	+	hydA	DVU1769	0.53	-0.0
1,833,157	+	hydA	DVU1769	0.53	+0.1
1,833,157	+	hydA	DVU1769	0.53	-1.4
1,833,157	+	hydA	DVU1769	0.53	+0.4
1,833,157	+	hydA	DVU1769	0.53	-0.2
1,833,157	+	hydA	DVU1769	0.53	-0.2
1,833,157	+	hydA	DVU1769	0.53	-0.1
1,833,165	-	hydA	DVU1769	0.54	+0.1
1,833,165	-	hydA	DVU1769	0.54	-0.2
1,833,165	-	hydA	DVU1769	0.54	-0.0
1,833,165	-	hydA	DVU1769	0.54	-0.4
1,833,165	-	hydA	DVU1769	0.54	-0.6
1,833,165	-	hydA	DVU1769	0.54	-0.4
1,833,165	-	hydA	DVU1769	0.54	-1.0
1,833,259	-	hydA	DVU1769	0.61	+0.8
1,833,261	+	hydA	DVU1769	0.61	-1.7
1,833,269	-	hydA	DVU1769	0.62	-0.1
1,833,451	+	hydA	DVU1769	0.76	-0.0
1,833,451	+	hydA	DVU1769	0.76	+0.3
1,833,459	-	hydA	DVU1769	0.77	+0.1
1,833,476	-	hydA	DVU1769	0.78	+0.2
1,833,535	-	hydA	DVU1769	0.83	-0.1
1,833,537	+	hydA	DVU1769	0.83	-3.0
1,833,545	-	hydA	DVU1769	0.84	+1.4
1,833,564	-	hydA	DVU1769	0.85	-0.1
1,833,773	+				-1.5
1,833,960	+	hydB	DVU1770	0.54	+0.2
1,833,960	+	hydB	DVU1770	0.54	+0.2
1,833,968	-	hydB	DVU1770	0.56	-0.9
1,833,968	-	hydB	DVU1770	0.56	-0.3
1,833,978	-	hydB	DVU1770	0.59	+0.3
1,833,983	+	hydB	DVU1770	0.60	-1.1
1,833,986	-	hydB	DVU1770	0.61	-0.0
1,834,034	+	hydB	DVU1770	0.74	-0.3
1,834,044	+	hydB	DVU1770	0.76	-2.2
1,834,044	+	hydB	DVU1770	0.76	+1.2
1,834,044	+	hydB	DVU1770	0.76	-2.4
1,834,052	+	hydB	DVU1770	0.78	-0.2
1,834,052	-	hydB	DVU1770	0.78	-2.1
1,834,121	+				-1.4
1,834,347	+				+0.1
1,834,394	-				+0.1
1,834,445	+				+0.1
1,834,696	-	hydC	DVU1771	0.17	+0.0
1,834,752	-	hydC	DVU1771	0.20	-2.8
1,834,762	-	hydC	DVU1771	0.21	+0.1
1,834,762	-	hydC	DVU1771	0.21	-1.3
1,834,762	-	hydC	DVU1771	0.21	-0.6
1,834,790	+	hydC	DVU1771	0.22	-0.2
1,834,857	+	hydC	DVU1771	0.26	-0.5
1,834,914	+	hydC	DVU1771	0.29	-0.3
1,835,040	+	hydC	DVU1771	0.36	-1.2
1,835,131	-	hydC	DVU1771	0.41	+0.2