Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1614

Experiment: Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%
1,698,913	-		DVU1613	0.17	-0.3
1,699,015	+		DVU1613	0.26	-0.1
1,699,023	-		DVU1613	0.27	-0.3
1,699,058	-		DVU1613	0.30	+0.3
1,699,095	-		DVU1613	0.34	+1.0
1,699,096	+		DVU1613	0.34	+0.1
1,699,104	-		DVU1613	0.35	+1.8
1,699,258	+		DVU1613	0.49	-0.2
1,699,278	-		DVU1613	0.51	-0.7
1,699,290	-		DVU1613	0.52	-0.1
1,699,316	-		DVU1613	0.55	-0.0
1,699,333	+		DVU1613	0.56	-0.2
1,699,341	-		DVU1613	0.57	-0.6
1,699,341	-		DVU1613	0.57	+0.8
1,699,393	-		DVU1613	0.62	+0.6
1,699,413	+		DVU1613	0.64	-0.4
1,699,463	+		DVU1613	0.69	+0.2
1,699,624	-		DVU1613	0.84	-0.4
1,699,829	+				+0.3
1,699,829	+				+0.7
1,699,829	+				-0.2
1,699,853	+				+0.3
1,699,950	-		DVU1614	0.27	-1.9
1,699,950	-		DVU1614	0.27	+0.5
1,699,995	-		DVU1614	0.35	-0.7
1,699,995	-		DVU1614	0.35	-1.1
1,700,048	-		DVU1614	0.45	+0.2
1,700,116	+		DVU1614	0.58	-0.7
1,700,121	+		DVU1614	0.59	-0.1
1,700,188	+		DVU1614	0.71	-0.5
1,700,222	-		DVU1614	0.78	-0.9
1,700,311	-				+0.1
1,700,336	-				+0.0
1,700,424	-				-0.6
1,700,616	-				-0.7
1,700,755	+				+0.2
1,700,810	-				-0.0
1,700,812	+				-0.9
1,700,919	+	paaK-2	DVU1615	0.13	+0.2
1,701,006	-	paaK-2	DVU1615	0.19	-1.1
1,701,104	-	paaK-2	DVU1615	0.27	+0.5
1,701,112	-	paaK-2	DVU1615	0.28	-0.2
1,701,123	+	paaK-2	DVU1615	0.28	+0.1
1,701,131	-	paaK-2	DVU1615	0.29	-0.1
1,701,254	-	paaK-2	DVU1615	0.38	-0.4
1,701,308	-	paaK-2	DVU1615	0.43	-2.9