Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1210
Experiment: Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2% |
---|---|---|---|---|---|
remove | |||||
1,300,615 | - | DVU1210 | 0.22 | -0.5 | |
1,301,058 | - | -0.4 | |||
1,301,840 | - | fsxA | DVU1212 | 0.16 | -0.0 |
1,301,851 | - | fsxA | DVU1212 | 0.18 | +0.1 |
1,301,876 | + | fsxA | DVU1212 | 0.22 | -0.2 |
1,301,909 | - | fsxA | DVU1212 | 0.28 | -0.0 |
1,301,936 | + | fsxA | DVU1212 | 0.33 | -0.2 |
1,301,952 | - | fsxA | DVU1212 | 0.36 | -0.1 |
Or see this region's nucleotide sequence