Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2769

Experiment: Varel_Bryant_medium_Glucose with Furaltadone 0.1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Furaltadone 0.1 mM
3,427,444	+				-0.5
3,427,495	+		BT2768	0.14	-0.5
3,427,497	+		BT2768	0.15	+0.4
3,427,518	-		BT2768	0.17	-0.1
3,427,558	+		BT2768	0.21	+0.7
3,427,559	-		BT2768	0.21	-1.1
3,427,559	-		BT2768	0.21	-1.9
3,427,588	-		BT2768	0.24	+0.4
3,427,595	-		BT2768	0.25	+2.5
3,427,642	-		BT2768	0.30	-2.5
3,427,642	-		BT2768	0.30	-2.2
3,427,649	+		BT2768	0.31	-2.9
3,427,653	-		BT2768	0.31	+0.5
3,427,681	+		BT2768	0.34	+2.5
3,427,681	+		BT2768	0.34	+2.5
3,427,683	+		BT2768	0.34	-2.6
3,427,684	-		BT2768	0.34	-1.1
3,427,685	+		BT2768	0.34	-0.8
3,427,703	+		BT2768	0.36	-0.6
3,427,707	+		BT2768	0.37	-0.7
3,427,708	-		BT2768	0.37	-0.1
3,427,795	-		BT2768	0.46	+0.9
3,427,795	-		BT2768	0.46	+1.7
3,427,797	-		BT2768	0.46	+1.3
3,427,797	-		BT2768	0.46	-1.6
3,427,802	+		BT2768	0.47	-0.5
3,427,838	+		BT2768	0.50	-0.8
3,427,901	+		BT2768	0.57	+1.9
3,427,944	+		BT2768	0.62	-2.8
3,427,945	-		BT2768	0.62	+0.9
3,427,945	-		BT2768	0.62	-0.5
3,427,960	-		BT2768	0.63	+0.9
3,427,966	-		BT2768	0.64	-1.1
3,427,970	-		BT2768	0.64	-0.0
3,427,970	-		BT2768	0.64	-1.1
3,427,991	+		BT2768	0.67	-1.4
3,428,000	-		BT2768	0.68	-1.5
3,428,000	-		BT2768	0.68	-0.1
3,428,000	-		BT2768	0.68	-3.4
3,428,046	+		BT2768	0.72	-0.1
3,428,058	+		BT2768	0.74	-2.1
3,428,058	+		BT2768	0.74	-3.4
3,428,058	+		BT2768	0.74	+0.3
3,428,062	+		BT2768	0.74	+3.3
3,428,065	-		BT2768	0.74	-0.4
3,428,081	+		BT2768	0.76	-1.9
3,428,082	-		BT2768	0.76	-1.2
3,428,085	+		BT2768	0.76	-0.9
3,428,086	-		BT2768	0.77	+1.1
3,428,124	+		BT2768	0.81	-1.5
3,428,153	-		BT2768	0.84	-1.1
3,428,164	+		BT2768	0.85	+0.3
3,428,207	-		BT2768	0.89	-4.6
3,428,274	-				+0.7
3,428,277	-				-1.3
3,428,309	-				-1.6
3,428,347	+				+0.9
3,428,357	+				-0.3
3,428,357	+				-1.6
3,428,433	+				+1.2
3,428,467	+				-1.1
3,428,475	+				-0.1
3,428,598	-				-1.1
3,428,613	-				+3.5
3,428,756	+				-1.6
3,428,789	+		BT2769	0.12	-0.9
3,428,789	+		BT2769	0.12	-0.1
3,428,798	+		BT2769	0.12	-0.8
3,428,821	+		BT2769	0.13	+2.1
3,428,832	-		BT2769	0.13	-2.6
3,428,832	-		BT2769	0.13	+0.1
3,428,846	+		BT2769	0.13	+0.9
3,428,847	-		BT2769	0.13	+0.9
3,428,853	-		BT2769	0.13	-0.1
3,428,854	+		BT2769	0.13	-2.1
3,428,854	+		BT2769	0.13	+1.6
3,428,854	+		BT2769	0.13	+0.6
3,428,855	-		BT2769	0.13	-0.3
3,428,894	+		BT2769	0.14	-1.2
3,428,894	+		BT2769	0.14	-1.1
3,428,901	-		BT2769	0.15	-1.9
3,428,907	+		BT2769	0.15	-2.2
3,428,908	+		BT2769	0.15	-2.1
3,428,910	-		BT2769	0.15	-1.4
3,428,957	+		BT2769	0.16	-1.3
3,428,988	+		BT2769	0.17	-1.3
3,429,047	+		BT2769	0.18	+1.4
3,429,125	-		BT2769	0.21	-1.0
3,429,126	+		BT2769	0.21	-1.6
3,429,131	+		BT2769	0.21	+0.9
3,429,152	+		BT2769	0.21	-0.2
3,429,152	+		BT2769	0.21	-0.6
3,429,189	-		BT2769	0.22	-1.1
3,429,308	-		BT2769	0.25	-1.7
3,429,308	-		BT2769	0.25	-2.1
3,429,308	-		BT2769	0.25	+0.2
3,429,315	-		BT2769	0.26	+0.9
3,429,324	-		BT2769	0.26	+0.9
3,429,324	-		BT2769	0.26	-1.9
3,429,341	-		BT2769	0.26	+0.5
3,429,361	+		BT2769	0.27	-0.5
3,429,362	-		BT2769	0.27	-1.6
3,429,365	+		BT2769	0.27	-0.1
3,429,375	-		BT2769	0.27	-0.7
3,429,375	-		BT2769	0.27	-1.6
3,429,437	+		BT2769	0.29	+0.4
3,429,439	+		BT2769	0.29	+1.5
3,429,451	+		BT2769	0.29	+0.5
3,429,465	+		BT2769	0.30	-1.1
3,429,485	+		BT2769	0.30	-1.6
3,429,539	+		BT2769	0.31	-2.6
3,429,541	+		BT2769	0.32	+1.9
3,429,550	-		BT2769	0.32	+1.9
3,429,553	-		BT2769	0.32	+0.9
3,429,605	+		BT2769	0.33	-0.1
3,429,608	+		BT2769	0.33	-1.0
3,429,618	-		BT2769	0.34	+0.3
3,429,651	+		BT2769	0.34	-0.6
3,429,651	+		BT2769	0.34	-2.1
3,429,652	-		BT2769	0.34	+0.9
3,429,652	-		BT2769	0.34	-4.2
3,429,782	+		BT2769	0.38	-0.6
3,429,783	-		BT2769	0.38	+0.5
3,429,812	-		BT2769	0.39	-0.1
3,429,843	-		BT2769	0.39	-0.1
3,429,853	-		BT2769	0.40	-0.8
3,429,911	-		BT2769	0.41	-1.8
3,429,938	+		BT2769	0.42	-0.5
3,429,938	+		BT2769	0.42	-0.4
3,429,939	-		BT2769	0.42	-2.9
3,429,942	-		BT2769	0.42	+0.9
3,429,947	+		BT2769	0.42	+0.9
3,429,948	-		BT2769	0.42	-0.6
3,429,948	-		BT2769	0.42	-2.1
3,429,969	+		BT2769	0.43	-1.1
3,429,975	+		BT2769	0.43	-1.1
3,429,976	-		BT2769	0.43	-1.4
3,429,979	-		BT2769	0.43	-1.5
3,430,004	+		BT2769	0.44	+1.7
3,430,018	+		BT2769	0.44	+1.9
3,430,061	+		BT2769	0.45	+0.0
3,430,062	-		BT2769	0.45	-1.6
3,430,067	-		BT2769	0.45	+1.5
3,430,075	+				-2.1
3,430,079	+		BT2769	0.46	-1.1
3,430,084	-		BT2769	0.46	-0.1
3,430,088	+		BT2769	0.46	-1.1
3,430,103	-		BT2769	0.46	+0.3
3,430,114	-		BT2769	0.47	+0.5
3,430,123	+		BT2769	0.47	-0.7
3,430,134	+		BT2769	0.47	-0.1
3,430,190	+		BT2769	0.49	-2.0
3,430,193	+		BT2769	0.49	-0.3
3,430,203	-		BT2769	0.49	+0.9
3,430,204	+		BT2769	0.49	-1.8
3,430,208	+		BT2769	0.49	-1.1
3,430,209	-		BT2769	0.49	-0.7
3,430,277	+		BT2769	0.51	+2.1
3,430,280	-		BT2769	0.51	-0.1
3,430,329	+		BT2769	0.52	+0.9
3,430,347	-		BT2769	0.53	+2.7
3,430,393	+		BT2769	0.54	+1.5
3,430,395	+		BT2769	0.54	-0.6
3,430,395	+		BT2769	0.54	-2.1
3,430,398	-		BT2769	0.54	-0.3
3,430,468	+		BT2769	0.56	-0.6
3,430,468	+		BT2769	0.56	-0.6
3,430,468	+		BT2769	0.56	-0.5
3,430,470	+		BT2769	0.56	-0.4
3,430,471	-		BT2769	0.56	-2.1
3,430,487	+		BT2769	0.56	+0.5
3,430,487	+		BT2769	0.56	+1.5
3,430,488	-		BT2769	0.56	+2.3
3,430,492	+		BT2769	0.57	-1.2
3,430,492	+		BT2769	0.57	-2.4
3,430,493	-		BT2769	0.57	-3.1
3,430,493	-		BT2769	0.57	-0.8
3,430,505	-		BT2769	0.57	+0.5
3,430,515	-		BT2769	0.57	-2.4
3,430,549	-		BT2769	0.58	-0.4
3,430,697	+		BT2769	0.62	-1.9
3,430,706	-		BT2769	0.62	-0.8
3,430,709	+		BT2769	0.62	+1.5
3,430,709	+		BT2769	0.62	+1.1
3,430,712	+		BT2769	0.62	+1.5
3,430,712	+		BT2769	0.62	-0.7
3,430,768	+		BT2769	0.64	-0.5
3,430,768	+		BT2769	0.64	+1.1
3,430,783	+		BT2769	0.64	+0.2
3,430,846	+		BT2769	0.66	-0.9
3,430,846	+		BT2769	0.66	-0.1
3,430,847	-		BT2769	0.66	-0.1
3,430,847	-		BT2769	0.66	-0.1
3,430,853	+		BT2769	0.66	-0.3
3,430,886	-		BT2769	0.67	+0.5
3,430,906	-		BT2769	0.68	+0.2
3,430,923	-		BT2769	0.68	-0.1
3,430,929	+		BT2769	0.68	+1.5
3,430,929	-		BT2769	0.68	-0.5
3,430,930	+		BT2769	0.68	-2.2
3,430,943	-		BT2769	0.68	-1.1
3,430,961	+		BT2769	0.69	+1.2
3,430,983	+		BT2769	0.70	-0.1
3,430,983	+		BT2769	0.70	-1.4
3,430,985	+		BT2769	0.70	+0.5
3,431,005	+		BT2769	0.70	-2.1
3,431,005	+		BT2769	0.70	+1.5
3,431,006	-		BT2769	0.70	-2.8
3,431,006	-		BT2769	0.70	+1.9
3,431,010	+		BT2769	0.70	-0.4
3,431,010	+		BT2769	0.70	-0.2
3,431,016	-		BT2769	0.70	+0.4
3,431,060	+		BT2769	0.72	-1.1
3,431,087	+		BT2769	0.72	-1.0
3,431,088	-		BT2769	0.72	+0.7
3,431,207	-		BT2769	0.75	-2.3
3,431,222	+		BT2769	0.76	+1.3
3,431,231	-		BT2769	0.76	-1.6
3,431,256	+		BT2769	0.77	-0.7
3,431,274	-		BT2769	0.77	+0.9
3,431,317	+		BT2769	0.78	-0.7
3,431,382	-		BT2769	0.80	+0.3
3,431,409	+		BT2769	0.81	-0.2
3,431,422	-		BT2769	0.81	-1.1
3,431,422	-		BT2769	0.81	-0.1
3,431,425	+		BT2769	0.81	+0.9
3,431,425	+		BT2769	0.81	-0.6
3,431,429	+		BT2769	0.81	-0.0
3,431,429	+		BT2769	0.81	-2.1
3,431,430	-		BT2769	0.81	-0.5
3,431,430	-		BT2769	0.81	-2.1
3,431,431	+		BT2769	0.81	-1.2
3,431,475	-		BT2769	0.83	-0.1
3,431,478	-		BT2769	0.83	-0.3
3,431,545	-		BT2769	0.84	-2.1
3,431,561	+		BT2769	0.85	+0.3
3,431,577	+		BT2769	0.85	+0.5
3,431,611	+		BT2769	0.86	+2.7
3,431,612	-		BT2769	0.86	+0.9
3,431,633	+		BT2769	0.87	-2.1
3,431,634	-		BT2769	0.87	-3.6
3,431,663	+		BT2769	0.87	-1.0
3,431,664	-		BT2769	0.88	-0.6
3,431,669	+		BT2769	0.88	-0.7
3,431,669	+		BT2769	0.88	-0.6
3,431,670	-		BT2769	0.88	-0.1
3,431,715	-		BT2769	0.89	-2.2
3,431,750	+		BT2769	0.90	+3.5
3,431,751	-		BT2769	0.90	-1.1
3,431,751	-		BT2769	0.90	+0.9
3,431,782	-				-3.1
3,431,786	+				+0.9
3,431,787	-				-1.1
3,431,787	-				-0.7
3,431,842	-				-0.1
3,431,843	+				-1.6
3,431,843	+				+1.1
3,431,845	+				-0.1
3,431,846	-				+2.7
3,431,846	-				-0.6
3,431,859	-				+1.9
3,431,887	+				-0.1
3,431,891	+				-2.2
3,431,891	+				-1.1
3,431,914	+				+0.9
3,431,946	-				-0.1
3,431,990	+				+1.3
3,432,011	+				-0.5
3,432,031	-				-1.1
3,432,050	-				-0.8
3,432,063	+				-1.1
3,432,068	-				-1.0
3,432,113	-				-0.6
3,432,116	+				+0.9
3,432,116	+				-1.0
3,432,117	-				+1.2
3,432,117	-				-1.6
3,432,151	+				-0.2
3,432,257	-		BT2770	0.20	-2.1
3,432,260	+		BT2770	0.21	+2.7
3,432,281	+		BT2770	0.25	-0.1
3,432,294	+		BT2770	0.27	-2.0
3,432,335	+		BT2770	0.35	-1.6
3,432,354	+		BT2770	0.39	-0.1
3,432,355	-		BT2770	0.39	-1.0
3,432,363	-		BT2770	0.40	-3.6
3,432,410	-		BT2770	0.49	-1.5
3,432,425	+		BT2770	0.52	-0.6
3,432,481	-		BT2770	0.63	-1.2
3,432,488	+		BT2770	0.64	-0.8
3,432,489	-		BT2770	0.64	-0.1
3,432,528	-		BT2770	0.72	+0.2
3,432,542	+		BT2770	0.74	-1.1
3,432,543	-		BT2770	0.74	+0.2
3,432,571	-		BT2770	0.80	-1.8
3,432,574	+		BT2770	0.80	+1.3
3,432,574	+		BT2770	0.80	-1.1
3,432,575	-		BT2770	0.80	-1.3
3,432,579	-		BT2770	0.81	-0.3
3,432,633	+				+0.5
3,432,677	+				-0.1
3,432,678	-				-0.1
3,432,679	+				+1.7
3,432,686	+				-1.6
3,432,691	+				-2.8
3,432,731	+				+0.5
3,432,731	+				-3.4
3,432,732	-				+2.7
3,432,733	+				-1.6
3,432,734	-				+1.5
3,432,785	+				-0.6
3,432,785	+				-1.6
3,432,871	+		BT2771	0.14	-3.3
3,432,884	-		BT2771	0.15	-2.1
3,433,049	+		BT2771	0.27	-1.3
3,433,064	+		BT2771	0.29	-1.2
3,433,064	+		BT2771	0.29	-1.4
3,433,085	-		BT2771	0.30	-1.6
3,433,087	+		BT2771	0.30	-1.9
3,433,087	+		BT2771	0.30	+0.4
3,433,088	-		BT2771	0.30	-0.1
3,433,123	+		BT2771	0.33	-1.9