Experiment: Varel_Bryant_medium_Glucose with Furaltadone 0.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0735 and BT0736 are separated by 15 nucleotides BT0736 and BT0737 are separated by 206 nucleotides
BT0735: BT0735 - aspartate decarboxylase AsdA (NCBI ptt file), at 910,477 to 912,150
BT0735
BT0736: BT0736 - putative transport protein (NCBI ptt file), at 912,166 to 913,860
BT0736
BT0737: BT0737 - formate--tetrahydrofolate ligase (NCBI ptt file), at 914,067 to 915,734
BT0737
Position (kb) 912
913
914 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 911.531 kb on - strand, within BT0735 at 911.535 kb on - strand, within BT0735 at 911.751 kb on + strand, within BT0735 at 911.754 kb on - strand, within BT0735 at 911.977 kb on - strand, within BT0735 at 912.205 kb on + strand at 912.276 kb on + strand at 912.300 kb on + strand at 912.315 kb on + strand at 912.316 kb on - strand at 912.354 kb on - strand, within BT0736 at 913.376 kb on + strand, within BT0736 at 913.510 kb on + strand, within BT0736 at 913.510 kb on + strand, within BT0736 at 913.537 kb on + strand, within BT0736 at 913.586 kb on - strand, within BT0736 at 913.634 kb on - strand, within BT0736 at 913.714 kb on + strand at 913.802 kb on - strand at 913.848 kb on + strand at 913.862 kb on + strand at 913.862 kb on + strand at 913.877 kb on + strand at 913.956 kb on + strand at 913.963 kb on + strand at 914.081 kb on - strand at 914.284 kb on + strand, within BT0737 at 914.284 kb on + strand, within BT0737 at 914.427 kb on + strand, within BT0737 at 914.742 kb on - strand, within BT0737 at 914.745 kb on + strand, within BT0737
Per-strain Table
Position Strand Gene LocusTag Fraction Varel_Bryant_medium_Glucose with Furaltadone 0.1 mM remove 911,531 - BT0735 0.63 -3.0 911,535 - BT0735 0.63 -1.6 911,751 + BT0735 0.76 -1.6 911,754 - BT0735 0.76 -0.0 911,977 - BT0735 0.90 -2.0 912,205 + -0.9 912,276 + -2.0 912,300 + -1.0 912,315 + +1.0 912,316 - +1.7 912,354 - BT0736 0.11 -0.0 913,376 + BT0736 0.71 -2.4 913,510 + BT0736 0.79 -0.0 913,510 + BT0736 0.79 -2.8 913,537 + BT0736 0.81 -3.6 913,586 - BT0736 0.84 -2.0 913,634 - BT0736 0.87 -2.4 913,714 + -0.0 913,802 - -2.6 913,848 + -1.0 913,862 + -1.6 913,862 + -2.8 913,877 + -1.6 913,956 + -2.0 913,963 + -5.3 914,081 - -1.6 914,284 + BT0737 0.13 -1.1 914,284 + BT0737 0.13 -0.1 914,427 + BT0737 0.22 +1.3 914,742 - BT0737 0.40 -0.1 914,745 + BT0737 0.41 -0.6
Or see this region's nucleotide sequence