Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3189

Experiment: Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%
3,347,301	+	hup-4	DVU3187	0.89	+1.2
3,347,320	-				-2.3
3,347,480	+				+0.0
3,347,486	+				-0.1
3,347,493	-				-0.3
3,347,567	+		DVU3188	0.12	+0.9
3,347,576	-		DVU3188	0.13	-0.8
3,347,578	+		DVU3188	0.13	-0.2
3,347,593	-		DVU3188	0.15	-0.3
3,347,696	+		DVU3188	0.30	+0.2
3,347,714	-		DVU3188	0.32	+0.1
3,347,714	-		DVU3188	0.32	-1.7
3,347,714	-		DVU3188	0.32	+0.1
3,347,758	+		DVU3188	0.38	-1.1
3,347,766	-		DVU3188	0.39	-0.9
3,347,801	+		DVU3188	0.44	-0.7
3,347,815	-		DVU3188	0.46	+0.0
3,347,891	+		DVU3188	0.57	-0.4
3,347,899	-		DVU3188	0.58	+1.8
3,347,910	-		DVU3188	0.59	+0.2
3,348,142	-				-1.8
3,348,177	+				+0.7
3,348,298	-				+0.1
3,348,326	+				-0.2
3,348,334	-				-0.9
3,348,334	-				-0.4
3,348,388	-				-0.0
3,348,511	-		DVU3189	0.19	+1.5
3,348,522	+		DVU3189	0.20	+1.2
3,348,533	+		DVU3189	0.21	+0.4
3,348,556	+		DVU3189	0.23	+0.2
3,348,645	+		DVU3189	0.29	-0.0
3,348,675	+		DVU3189	0.32	+0.2
3,348,688	+		DVU3189	0.33	+1.2
3,348,688	+		DVU3189	0.33	-0.0
3,348,688	+		DVU3189	0.33	+0.1
3,348,696	-		DVU3189	0.33	-0.0
3,348,696	-		DVU3189	0.33	+0.1
3,348,696	-		DVU3189	0.33	-1.9
3,348,696	-		DVU3189	0.33	-0.3
3,348,696	-		DVU3189	0.33	-0.2
3,348,696	-		DVU3189	0.33	-0.1
3,348,696	-		DVU3189	0.33	+0.0
3,348,696	-		DVU3189	0.33	+0.1
3,348,802	+		DVU3189	0.42	+0.0
3,348,907	-		DVU3189	0.50	+0.1
3,349,021	-		DVU3189	0.58	-0.5
3,349,021	-		DVU3189	0.58	+1.1
3,349,054	-		DVU3189	0.61	-0.0
3,349,073	+		DVU3189	0.62	+0.2
3,349,240	-		DVU3189	0.75	+1.3
3,349,309	+		DVU3189	0.81	+0.9
3,349,329	-		DVU3189	0.82	+0.3
3,349,359	+		DVU3189	0.84	+0.0
3,349,359	+		DVU3189	0.84	-0.1
3,349,366	+		DVU3189	0.85	-1.2
3,349,516	+				-0.4
3,349,573	+				+0.1