Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3149

Experiment: Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%
3,299,725	-	malQ	DVU3148	0.48	+0.1
3,299,791	-	malQ	DVU3148	0.52	-0.1
3,299,791	-	malQ	DVU3148	0.52	-0.7
3,299,821	-	malQ	DVU3148	0.54	+0.4
3,299,828	-	malQ	DVU3148	0.54	-0.1
3,299,830	+	malQ	DVU3148	0.55	-0.8
3,299,906	-	malQ	DVU3148	0.60	-0.3
3,299,952	-	malQ	DVU3148	0.63	-1.2
3,300,083	-	malQ	DVU3148	0.71	+0.3
3,300,083	-	malQ	DVU3148	0.71	-0.2
3,300,096	-	malQ	DVU3148	0.72	-0.1
3,300,140	-	malQ	DVU3148	0.75	+0.3
3,300,213	-	malQ	DVU3148	0.80	+1.3
3,300,301	+	malQ	DVU3148	0.86	-0.8
3,300,318	-	malQ	DVU3148	0.87	-1.2
3,300,322	+	malQ	DVU3148	0.87	+0.0
3,300,357	+	malQ	DVU3148	0.89	+1.2
3,300,516	+				-0.3
3,300,665	-				-0.2
3,300,755	+				-0.3
3,300,927	-	sppA	DVU3149	0.23	+0.7
3,301,096	+	sppA	DVU3149	0.42	+0.7
3,301,190	-	sppA	DVU3149	0.52	+1.0
3,301,192	-	sppA	DVU3149	0.52	-0.1
3,301,344	+	sppA	DVU3149	0.69	-0.3
3,301,367	+	sppA	DVU3149	0.72	-0.1
3,301,375	-	sppA	DVU3149	0.73	+1.0