Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1828

Experiment: Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%
1,892,586	+		DVU1827	0.21	+0.0
1,892,594	-		DVU1827	0.22	-0.0
1,892,694	+		DVU1827	0.30	-0.2
1,892,696	+		DVU1827	0.30	+0.0
1,892,974	+		DVU1827	0.53	+0.0
1,893,185	+		DVU1827	0.70	-0.2
1,893,185	+		DVU1827	0.70	-0.5
1,893,193	-		DVU1827	0.71	+0.2
1,893,434	-				+0.1
1,893,436	+				-1.9
1,893,496	-				+0.6
1,893,507	+				-2.5
1,893,531	+				+0.3
1,893,539	-				-0.0
1,893,597	-				+1.6
1,893,823	+	gidA	DVU1828	0.14	-0.8
1,893,987	+	gidA	DVU1828	0.23	+0.9
1,894,222	+	gidA	DVU1828	0.35	+1.1
1,894,227	-	gidA	DVU1828	0.36	-0.4
1,894,353	-	gidA	DVU1828	0.42	+2.2
1,894,528	+	gidA	DVU1828	0.51	+0.9
1,894,675	+	gidA	DVU1828	0.59	-0.0
1,894,688	-	gidA	DVU1828	0.60	-0.1
1,894,688	-	gidA	DVU1828	0.60	+1.3
1,894,977	+	gidA	DVU1828	0.75	+1.0
1,895,086	+	gidA	DVU1828	0.81	+1.7
1,895,087	-	gidA	DVU1828	0.81	+0.8
1,895,098	+	gidA	DVU1828	0.82	+0.6
1,895,621	+				-0.8
1,895,643	-				-0.6
1,895,673	-				-1.8
1,895,715	+				-0.6
1,895,748	-				-0.8
1,895,761	+				-0.5
1,895,789	+				-0.3
1,895,797	-				-1.1
1,895,861	+		DVU1830	0.15	-1.9
1,895,902	-		DVU1830	0.18	-1.3
1,895,935	+		DVU1830	0.22	-1.6
1,896,019	+		DVU1830	0.29	-1.7
1,896,115	+		DVU1830	0.38	-0.4
1,896,123	-		DVU1830	0.39	+1.0
1,896,123	-		DVU1830	0.39	-0.8
1,896,158	+		DVU1830	0.42	+0.9
1,896,385	-		DVU1830	0.64	-1.2