Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1443

Experiment: Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%
1,518,830	-				+0.1
1,518,907	+				+0.4
1,518,907	+				-0.7
1,518,907	+				-0.1
1,518,907	+				-0.3
1,518,907	+				-1.0
1,518,907	+				+0.6
1,518,907	+				+0.4
1,518,907	+				+0.0
1,518,915	-				+0.0
1,519,002	+				-0.3
1,519,196	+		DVU1442	0.57	-0.4
1,519,214	+		DVU1442	0.62	+0.4
1,519,214	+		DVU1442	0.62	+0.8
1,519,240	-		DVU1442	0.69	-1.8
1,519,268	-		DVU1442	0.76	+0.4
1,519,303	+		DVU1442	0.85	+0.7
1,519,337	+				+0.2
1,519,345	-				-0.4
1,519,345	-				-0.9
1,519,345	-				-0.7
1,519,345	-				+0.3
1,519,467	-				-1.0
1,519,618	-				-0.8
1,519,699	+				+0.5
1,519,701	+				-0.9
1,519,738	-				-0.4
1,519,738	-				-0.3
1,519,831	-				+0.2
1,519,912	+				+0.9
1,519,961	-				+0.3
1,520,083	-	flgE	DVU1443	0.15	+1.3
1,520,139	+	flgE	DVU1443	0.19	+1.2
1,520,248	+	flgE	DVU1443	0.25	+2.1
1,520,323	+	flgE	DVU1443	0.29	+1.1
1,520,380	+	flgE	DVU1443	0.33	-0.5
1,520,380	+	flgE	DVU1443	0.33	+0.3
1,520,380	+	flgE	DVU1443	0.33	+1.3
1,520,527	-	flgE	DVU1443	0.41	+0.7
1,520,614	-	flgE	DVU1443	0.47	+0.9
1,520,659	+	flgE	DVU1443	0.49	+0.1
1,520,700	+	flgE	DVU1443	0.52	+1.9
1,520,786	+	flgE	DVU1443	0.57	-0.4
1,520,794	-	flgE	DVU1443	0.57	-0.1
1,520,826	-	flgE	DVU1443	0.59	+0.8
1,520,864	+	flgE	DVU1443	0.61	+0.2
1,520,938	-	flgE	DVU1443	0.66	+0.8
1,520,994	-	flgE	DVU1443	0.69	+0.7
1,521,135	-	flgE	DVU1443	0.77	+0.4
1,521,176	+	flgE	DVU1443	0.80	+1.1
1,521,236	+	flgE	DVU1443	0.83	-1.1
1,521,298	+	flgE	DVU1443	0.87	+0.9
1,521,306	-	flgE	DVU1443	0.87	+0.6
1,521,378	-				+0.8
1,521,422	+				+1.1
1,521,430	-				+0.1
1,521,488	-				+0.9
1,521,488	-				+1.1
1,521,488	-				+0.6
1,521,514	+				+0.6
1,521,649	-				-1.2
1,521,680	-	flgD	DVU1444	0.13	-0.3
1,521,711	+	flgD	DVU1444	0.17	-0.0
1,521,721	-	flgD	DVU1444	0.18	+0.4
1,521,788	-	flgD	DVU1444	0.26	+1.1
1,521,807	+	flgD	DVU1444	0.29	+0.5
1,521,827	+	flgD	DVU1444	0.31	+1.0
1,521,835	-	flgD	DVU1444	0.32	-0.3
1,521,878	-	flgD	DVU1444	0.38	+0.9
1,521,884	+	flgD	DVU1444	0.38	+1.2
1,521,927	-	flgD	DVU1444	0.44	+0.9
1,522,083	-	flgD	DVU1444	0.63	+0.6
1,522,114	-	flgD	DVU1444	0.67	+1.1
1,522,160	-	flgD	DVU1444	0.73	+0.2
1,522,184	-	flgD	DVU1444	0.76	+1.0
1,522,184	-	flgD	DVU1444	0.76	+0.7
1,522,238	-	flgD	DVU1444	0.83	+2.9
1,522,320	-				+1.1
1,522,398	+				+0.9
1,522,469	+				+1.0