Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2889

Experiment: Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%
2,986,363	+				+0.7
2,986,363	+				+1.2
2,986,363	+				-0.8
2,986,371	-				+0.3
2,986,371	-				+0.1
2,986,371	-				-1.3
2,986,371	-				-1.0
2,986,389	+				-0.4
2,986,389	+				-0.5
2,986,392	-				+0.5
2,986,434	+				-0.4
2,986,437	-				-1.8
2,986,442	-				-1.1
2,986,489	-				-0.4
2,986,539	+				-0.3
2,986,571	-		DVU2888	0.13	+1.5
2,986,571	-		DVU2888	0.13	-0.4
2,986,622	+		DVU2888	0.19	-0.3
2,986,628	-		DVU2888	0.19	-0.3
2,986,630	-		DVU2888	0.20	-0.8
2,986,639	+		DVU2888	0.21	-0.1
2,986,709	+		DVU2888	0.29	-1.0
2,986,709	+		DVU2888	0.29	-2.0
2,986,717	-		DVU2888	0.30	-1.1
2,986,717	-		DVU2888	0.30	+0.4
2,986,766	-		DVU2888	0.36	-0.2
2,986,795	+		DVU2888	0.40	+0.3
2,986,906	-		DVU2888	0.53	-0.4
2,986,993	+		DVU2888	0.64	+0.5
2,987,049	+		DVU2888	0.70	-0.1
2,987,183	-		DVU2888	0.86	-0.7
2,987,230	+				+0.1
2,987,230	+				+0.1
2,987,262	+				+0.9
2,987,289	+				-0.1
2,987,297	-				-0.3
2,987,471	+		DVU2889	0.33	-0.0
2,987,509	-		DVU2889	0.40	-0.3
2,987,574	-		DVU2889	0.52	-0.4
2,987,649	+		DVU2889	0.65	+1.2
2,987,717	+		DVU2889	0.78	+0.0
2,987,899	-				-0.6
2,987,984	-				-0.2
2,988,085	-				-1.5
2,988,086	+				-0.2
2,988,086	+				+2.8
2,988,087	+				-0.0
2,988,224	-		DVU2890	0.25	+1.2
2,988,293	+		DVU2890	0.35	-0.0
2,988,331	+		DVU2890	0.41	-0.2
2,988,370	-		DVU2890	0.46	+0.2
2,988,385	-		DVU2890	0.49	+0.2
2,988,391	-		DVU2890	0.49	+1.2
2,988,396	-		DVU2890	0.50	-0.2
2,988,396	-		DVU2890	0.50	-0.8
2,988,443	+		DVU2890	0.57	+0.2
2,988,451	-		DVU2890	0.58	-0.1
2,988,480	+		DVU2890	0.62	+0.1
2,988,586	+		DVU2890	0.78	+0.7
2,988,702	-				-0.6
2,988,715	+				+0.3