Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2021

Experiment: Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%
2,099,758	-		DVU2020	0.60	+0.1
2,099,782	+		DVU2020	0.61	+0.1
2,099,792	-		DVU2020	0.61	-0.1
2,099,918	+		DVU2020	0.66	+1.5
2,099,931	-		DVU2020	0.67	-0.2
2,100,010	+		DVU2020	0.70	-0.5
2,100,036	+		DVU2020	0.71	+1.4
2,100,068	-		DVU2020	0.72	-1.0
2,100,115	+		DVU2020	0.74	-0.3
2,100,414	+		DVU2020	0.86	+0.0
2,100,528	-				-0.2
2,100,558	-				-0.7
2,100,899	-		DVU2021	0.31	-0.3
2,101,154	-		DVU2021	0.85	+1.0
2,101,330	-				+0.6
2,101,342	-				-0.4
2,101,419	-				-0.5
2,101,484	+				-0.6
2,101,505	+				-1.0
2,101,547	+				-2.7
2,101,547	+				-0.7
2,101,555	-				-0.0
2,101,555	-				-1.8
2,101,572	+		DVU2022	0.10	-0.2
2,101,639	-		DVU2022	0.12	-0.7
2,101,662	+		DVU2022	0.13	-0.1
2,101,679	+		DVU2022	0.13	-0.2
2,101,687	-		DVU2022	0.13	+1.3
2,101,687	-		DVU2022	0.13	-0.2
2,101,816	-		DVU2022	0.17	-0.7
2,101,873	-		DVU2022	0.19	-0.4
2,101,897	-		DVU2022	0.19	+0.7
2,101,936	+		DVU2022	0.21	+1.8
2,102,005	-		DVU2022	0.23	-1.3
2,102,033	-		DVU2022	0.23	-0.3
2,102,038	+		DVU2022	0.23	-0.2
2,102,038	+		DVU2022	0.23	+0.4
2,102,145	+		DVU2022	0.27	-2.5
2,102,195	-		DVU2022	0.28	-0.1