Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1404

Experiment: Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pyruvate (fermenting) with Na2S as sulfur source with Casaminos 0.2%
1,472,056	+		DVU1402	0.53	+0.4
1,472,074	-		DVU1402	0.55	+0.8
1,472,111	+		DVU1402	0.59	+0.0
1,472,119	-		DVU1402	0.60	-1.6
1,472,163	+		DVU1402	0.64	-1.2
1,472,187	-		DVU1402	0.66	+1.4
1,472,233	+		DVU1402	0.71	-0.4
1,472,257	+		DVU1402	0.73	+1.2
1,472,257	+		DVU1402	0.73	-0.2
1,472,257	+		DVU1402	0.73	-0.8
1,472,309	-		DVU1402	0.79	+0.0
1,472,343	+		DVU1402	0.82	-0.4
1,472,664	+	cobO	DVU1403	0.28	-0.2
1,472,767	-	cobO	DVU1403	0.48	-1.7
1,472,787	+	cobO	DVU1403	0.52	+0.1
1,472,830	-	cobO	DVU1403	0.61	+1.3
1,472,830	-	cobO	DVU1403	0.61	+1.4
1,472,835	-	cobO	DVU1403	0.62	-0.4
1,472,913	-	cobO	DVU1403	0.77	-1.6
1,472,969	+	cobO	DVU1403	0.88	+0.7
1,472,974	+	cobO	DVU1403	0.89	+0.1
1,472,976	-	cobO	DVU1403	0.89	-0.4
1,472,977	-	cobO	DVU1403	0.90	+0.1
1,472,990	+				+1.2
1,472,990	+				+1.0
1,472,998	-				+0.7
1,473,036	-				-0.3
1,473,047	+				+1.8
1,473,087	-				-0.3
1,473,099	+				-0.3
1,473,175	-	pflA	DVU1404	0.15	+0.3
1,473,175	-	pflA	DVU1404	0.15	-0.4
1,473,212	+	pflA	DVU1404	0.19	-0.3
1,473,258	-	pflA	DVU1404	0.23	+0.2
1,473,260	-	pflA	DVU1404	0.23	+1.0
1,473,281	+	pflA	DVU1404	0.25	-0.2
1,473,289	-	pflA	DVU1404	0.26	-0.3
1,473,300	-	pflA	DVU1404	0.27	+0.1
1,473,318	+	pflA	DVU1404	0.28	-1.7
1,473,328	-	pflA	DVU1404	0.29	-0.5
1,473,455	+	pflA	DVU1404	0.41	+0.8
1,473,475	-	pflA	DVU1404	0.42	-1.1
1,473,489	+	pflA	DVU1404	0.44	-0.3
1,473,610	-	pflA	DVU1404	0.55	+0.2
1,473,645	+	pflA	DVU1404	0.58	+0.1
1,473,668	+	pflA	DVU1404	0.60	-0.2
1,473,677	-	pflA	DVU1404	0.61	+0.2
1,473,766	-	pflA	DVU1404	0.69	+0.7
1,473,805	+	pflA	DVU1404	0.72	+0.2
1,473,813	-	pflA	DVU1404	0.73	+1.5
1,473,813	-	pflA	DVU1404	0.73	+0.2
1,473,813	-	pflA	DVU1404	0.73	+2.2
1,473,870	+	pflA	DVU1404	0.78	-0.2
1,473,870	+	pflA	DVU1404	0.78	+0.3
1,473,878	-	pflA	DVU1404	0.79	+1.5
1,473,941	-	pflA	DVU1404	0.84	+1.4
1,473,955	+	pflA	DVU1404	0.86	+0.4
1,473,963	-	pflA	DVU1404	0.86	+4.4
1,474,044	+				+2.0
1,474,079	+				+0.0
1,474,097	-				-0.1
1,474,196	-		DVU1405	0.20	-0.1
1,474,203	-		DVU1405	0.21	-0.2
1,474,203	-		DVU1405	0.21	+0.2
1,474,203	-		DVU1405	0.21	-0.1
1,474,320	+		DVU1405	0.44	-1.9
1,474,342	+		DVU1405	0.49	-0.8
1,474,347	+		DVU1405	0.50	-0.3
1,474,423	+		DVU1405	0.65	+0.0
1,474,423	+		DVU1405	0.65	+0.1
1,474,480	-		DVU1405	0.76	-0.5
1,474,534	+		DVU1405	0.87	-0.7