Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00988 and SMc00987 are separated by 79 nucleotides SMc00987 and SMc00986 are separated by 374 nucleotides
SMc00988: SMc00988 - 4-hydroxybenzoate polyprenyltransferase, at 946,982 to 947,938
SMc00988
SMc00987: SMc00987 - hypothetical protein, at 948,018 to 948,584
SMc00987
SMc00986: SMc00986 - hypothetical protein, at 948,959 to 951,268
SMc00986
Position (kb) 948
949 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 947.940 kb on + strand at 947.956 kb on - strand at 947.991 kb on + strand at 947.991 kb on + strand at 947.991 kb on + strand at 947.991 kb on + strand at 947.991 kb on + strand at 947.991 kb on + strand at 947.991 kb on + strand at 947.992 kb on - strand at 947.992 kb on - strand at 947.998 kb on + strand at 947.999 kb on - strand at 947.999 kb on - strand at 948.167 kb on + strand, within SMc00987 at 948.294 kb on - strand, within SMc00987 at 948.294 kb on - strand, within SMc00987 at 948.406 kb on + strand, within SMc00987 at 948.503 kb on - strand, within SMc00987 at 948.575 kb on + strand at 948.575 kb on + strand at 948.576 kb on - strand at 948.589 kb on + strand at 948.663 kb on + strand at 948.971 kb on + strand at 948.972 kb on - strand at 949.051 kb on + strand at 949.051 kb on + strand at 949.052 kb on - strand at 949.058 kb on + strand at 949.059 kb on - strand at 949.059 kb on - strand at 949.059 kb on - strand at 949.061 kb on + strand at 949.112 kb on + strand at 949.142 kb on + strand at 949.142 kb on + strand at 949.334 kb on + strand, within SMc00986 at 949.334 kb on + strand, within SMc00986 at 949.334 kb on + strand, within SMc00986 at 949.335 kb on - strand, within SMc00986 at 949.335 kb on - strand, within SMc00986 at 949.335 kb on - strand, within SMc00986 at 949.337 kb on - strand, within SMc00986 at 949.337 kb on - strand at 949.339 kb on + strand, within SMc00986 at 949.339 kb on + strand, within SMc00986 at 949.340 kb on - strand, within SMc00986 at 949.340 kb on - strand, within SMc00986 at 949.340 kb on - strand, within SMc00986 at 949.388 kb on + strand, within SMc00986 at 949.388 kb on + strand, within SMc00986 at 949.388 kb on + strand, within SMc00986 at 949.389 kb on - strand, within SMc00986 at 949.389 kb on - strand, within SMc00986 at 949.389 kb on - strand, within SMc00986 at 949.389 kb on - strand, within SMc00986 at 949.454 kb on + strand, within SMc00986 at 949.454 kb on + strand, within SMc00986 at 949.454 kb on + strand, within SMc00986 at 949.455 kb on - strand, within SMc00986 at 949.455 kb on - strand, within SMc00986 at 949.455 kb on - strand, within SMc00986 at 949.490 kb on + strand, within SMc00986 at 949.490 kb on + strand, within SMc00986 at 949.490 kb on + strand, within SMc00986 at 949.491 kb on - strand, within SMc00986 at 949.547 kb on + strand, within SMc00986 at 949.547 kb on + strand, within SMc00986 at 949.547 kb on + strand, within SMc00986 at 949.548 kb on - strand, within SMc00986 at 949.548 kb on - strand, within SMc00986 at 949.548 kb on - strand, within SMc00986 at 949.576 kb on - strand, within SMc00986
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 947,940 + -0.0 947,956 - +0.0 947,991 + -0.7 947,991 + +0.4 947,991 + -0.5 947,991 + +0.4 947,991 + +0.0 947,991 + -0.4 947,991 + -1.4 947,992 - -0.0 947,992 - -0.5 947,998 + -1.3 947,999 - +2.7 947,999 - -1.8 948,167 + SMc00987 0.26 +2.5 948,294 - SMc00987 0.49 -0.2 948,294 - SMc00987 0.49 -0.5 948,406 + SMc00987 0.68 -1.9 948,503 - SMc00987 0.86 -0.5 948,575 + -0.2 948,575 + +1.5 948,576 - +0.5 948,589 + +1.0 948,663 + +0.1 948,971 + +0.6 948,972 - -0.3 949,051 + -0.8 949,051 + +0.7 949,052 - +0.0 949,058 + -0.4 949,059 - +0.4 949,059 - +0.0 949,059 - -0.0 949,061 + +0.5 949,112 + +0.7 949,142 + -1.3 949,142 + -0.3 949,334 + SMc00986 0.16 +0.2 949,334 + SMc00986 0.16 +0.2 949,334 + SMc00986 0.16 +0.5 949,335 - SMc00986 0.16 -1.0 949,335 - SMc00986 0.16 -0.4 949,335 - SMc00986 0.16 +0.4 949,337 - SMc00986 0.16 +1.2 949,337 - +1.2 949,339 + SMc00986 0.16 +0.9 949,339 + SMc00986 0.16 -0.8 949,340 - SMc00986 0.16 +0.5 949,340 - SMc00986 0.16 +0.5 949,340 - SMc00986 0.16 -1.8 949,388 + SMc00986 0.19 +0.1 949,388 + SMc00986 0.19 -1.3 949,388 + SMc00986 0.19 -0.1 949,389 - SMc00986 0.19 +0.5 949,389 - SMc00986 0.19 +0.5 949,389 - SMc00986 0.19 -0.9 949,389 - SMc00986 0.19 -0.4 949,454 + SMc00986 0.21 -0.8 949,454 + SMc00986 0.21 -0.1 949,454 + SMc00986 0.21 +0.1 949,455 - SMc00986 0.21 -1.3 949,455 - SMc00986 0.21 -1.6 949,455 - SMc00986 0.21 -1.3 949,490 + SMc00986 0.23 -1.1 949,490 + SMc00986 0.23 +0.3 949,490 + SMc00986 0.23 +3.1 949,491 - SMc00986 0.23 -2.9 949,547 + SMc00986 0.25 +0.2 949,547 + SMc00986 0.25 +0.7 949,547 + SMc00986 0.25 -0.6 949,548 - SMc00986 0.25 +0.4 949,548 - SMc00986 0.25 +0.7 949,548 - SMc00986 0.25 -0.5 949,576 - SMc00986 0.27 -0.4
Or see this region's nucleotide sequence