Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1153 and SMa1154 are separated by 92 nucleotides SMa1154 and SMa1155 are separated by 75 nucleotides SMa1155 and SMa1156 are separated by 65 nucleotides
SMa1153: SMa1153 - hypothetical protein, at 628,967 to 629,641
SMa1153
SMa1154: SMa1154 - hypothetical protein, at 629,734 to 630,129
SMa1154
SMa1155: SMa1155 - cation transport P-type ATPase, at 630,205 to 632,907
SMa1155
SMa1156: SMa1156 - alcohol dehydrogenase, at 632,973 to 634,046
SMa1156
Position (kb) 630
631
632
633 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 629.512 kb on - strand, within SMa1153 at 629.684 kb on + strand at 629.730 kb on + strand at 629.730 kb on + strand at 629.730 kb on + strand at 629.731 kb on - strand at 629.733 kb on + strand at 629.734 kb on - strand at 629.745 kb on + strand at 629.746 kb on - strand at 629.924 kb on - strand, within SMa1154 at 630.008 kb on - strand, within SMa1154 at 630.168 kb on - strand at 630.397 kb on + strand at 630.398 kb on - strand at 630.398 kb on - strand at 630.399 kb on + strand at 630.491 kb on + strand, within SMa1155 at 630.492 kb on - strand, within SMa1155 at 630.492 kb on - strand, within SMa1155 at 630.492 kb on - strand, within SMa1155 at 630.732 kb on + strand, within SMa1155 at 630.733 kb on - strand, within SMa1155 at 630.740 kb on + strand, within SMa1155 at 630.740 kb on + strand, within SMa1155 at 630.965 kb on + strand, within SMa1155 at 631.108 kb on - strand, within SMa1155 at 631.252 kb on - strand, within SMa1155 at 631.486 kb on + strand, within SMa1155 at 631.694 kb on + strand, within SMa1155 at 631.700 kb on + strand, within SMa1155 at 631.700 kb on + strand, within SMa1155 at 631.700 kb on + strand, within SMa1155 at 631.700 kb on + strand, within SMa1155 at 631.944 kb on - strand, within SMa1155 at 631.944 kb on - strand, within SMa1155 at 632.023 kb on + strand, within SMa1155 at 632.023 kb on + strand, within SMa1155 at 632.023 kb on + strand, within SMa1155 at 632.023 kb on + strand, within SMa1155 at 632.024 kb on - strand, within SMa1155 at 632.024 kb on - strand, within SMa1155 at 632.024 kb on - strand, within SMa1155 at 632.024 kb on - strand, within SMa1155 at 632.024 kb on - strand, within SMa1155 at 632.215 kb on - strand, within SMa1155 at 632.363 kb on + strand, within SMa1155 at 632.394 kb on - strand, within SMa1155 at 632.511 kb on - strand, within SMa1155 at 632.558 kb on - strand, within SMa1155 at 632.558 kb on - strand, within SMa1155 at 632.558 kb on - strand, within SMa1155 at 632.558 kb on - strand, within SMa1155 at 632.739 kb on + strand at 632.752 kb on + strand at 632.753 kb on - strand at 632.753 kb on - strand at 632.753 kb on - strand at 632.753 kb on - strand at 632.753 kb on - strand at 632.753 kb on - strand at 632.822 kb on + strand at 632.822 kb on + strand at 632.823 kb on - strand at 632.823 kb on - strand at 633.028 kb on + strand at 633.028 kb on + strand at 633.159 kb on - strand, within SMa1156 at 633.161 kb on + strand, within SMa1156 at 633.162 kb on - strand, within SMa1156 at 633.239 kb on + strand, within SMa1156 at 633.239 kb on + strand, within SMa1156 at 633.240 kb on - strand, within SMa1156 at 633.252 kb on - strand, within SMa1156 at 633.652 kb on + strand, within SMa1156 at 633.764 kb on + strand, within SMa1156 at 633.764 kb on + strand, within SMa1156 at 633.765 kb on - strand, within SMa1156 at 633.818 kb on - strand, within SMa1156
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 629,512 - SMa1153 0.81 +0.5 629,684 + +0.1 629,730 + -1.3 629,730 + +0.5 629,730 + +0.1 629,731 - +0.7 629,733 + +0.1 629,734 - +1.0 629,745 + -0.2 629,746 - -0.4 629,924 - SMa1154 0.48 +0.4 630,008 - SMa1154 0.69 -0.6 630,168 - -0.9 630,397 + +1.3 630,398 - +0.4 630,398 - -0.4 630,399 + +0.4 630,491 + SMa1155 0.11 +0.1 630,492 - SMa1155 0.11 +1.0 630,492 - SMa1155 0.11 -0.0 630,492 - SMa1155 0.11 +0.3 630,732 + SMa1155 0.19 -0.4 630,733 - SMa1155 0.20 +0.5 630,740 + SMa1155 0.20 -1.2 630,740 + SMa1155 0.20 +0.2 630,965 + SMa1155 0.28 +0.6 631,108 - SMa1155 0.33 +0.9 631,252 - SMa1155 0.39 -0.9 631,486 + SMa1155 0.47 +0.2 631,694 + SMa1155 0.55 +1.1 631,700 + SMa1155 0.55 +0.3 631,700 + SMa1155 0.55 +0.9 631,700 + SMa1155 0.55 +0.0 631,700 + SMa1155 0.55 +0.5 631,944 - SMa1155 0.64 +0.5 631,944 - SMa1155 0.64 +0.1 632,023 + SMa1155 0.67 -2.1 632,023 + SMa1155 0.67 +0.2 632,023 + SMa1155 0.67 -1.0 632,023 + SMa1155 0.67 +0.1 632,024 - SMa1155 0.67 +1.4 632,024 - SMa1155 0.67 +0.8 632,024 - SMa1155 0.67 +1.0 632,024 - SMa1155 0.67 +3.0 632,024 - SMa1155 0.67 +0.4 632,215 - SMa1155 0.74 -0.7 632,363 + SMa1155 0.80 +0.4 632,394 - SMa1155 0.81 +1.3 632,511 - SMa1155 0.85 +0.3 632,558 - SMa1155 0.87 -1.3 632,558 - SMa1155 0.87 +1.4 632,558 - SMa1155 0.87 +0.2 632,558 - SMa1155 0.87 -0.6 632,739 + -0.6 632,752 + +0.0 632,753 - +0.2 632,753 - -0.5 632,753 - +0.9 632,753 - +0.7 632,753 - +0.6 632,753 - +1.1 632,822 + +0.2 632,822 + -2.1 632,823 - +0.1 632,823 - +0.9 633,028 + +0.9 633,028 + +0.9 633,159 - SMa1156 0.17 +0.7 633,161 + SMa1156 0.18 -1.0 633,162 - SMa1156 0.18 +0.1 633,239 + SMa1156 0.25 +0.4 633,239 + SMa1156 0.25 +0.8 633,240 - SMa1156 0.25 +0.5 633,252 - SMa1156 0.26 -1.8 633,652 + SMa1156 0.63 +0.3 633,764 + SMa1156 0.74 -1.2 633,764 + SMa1156 0.74 +0.9 633,765 - SMa1156 0.74 -0.2 633,818 - SMa1156 0.79 +1.1
Or see this region's nucleotide sequence