Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_005710

Experiment: Acetylated xylan 10 g/L (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetylated xylan 10 g/L (C)
2,008,614	+				-1.9
2,008,707	-				+1.5
2,008,707	-				+1.5
2,008,767	+		ABIE53_005708	0.17	-2.7
2,009,136	+				+0.8
2,009,136	+				+1.5
2,009,136	+				+3.1
2,009,137	-				-0.1
2,009,261	+		ABIE53_005709	0.35	+1.5
2,009,394	-		ABIE53_005709	0.70	-0.0
2,009,431	+		ABIE53_005709	0.80	+1.5
2,009,486	-				+0.5
2,009,576	+				-2.1
2,009,678	-		ABIE53_005710	0.18	+1.5
2,009,678	-		ABIE53_005710	0.18	+1.5
2,009,821	+		ABIE53_005710	0.33	-1.5
2,009,822	-		ABIE53_005710	0.34	+2.5
2,010,052	+		ABIE53_005710	0.58	+1.5
2,010,083	+		ABIE53_005710	0.61	+0.7
2,010,156	+		ABIE53_005710	0.69	-2.1
2,010,295	+		ABIE53_005710	0.84	-1.8
2,010,399	-				+0.1
2,010,615	+				+0.5
2,010,615	+				-3.5
2,010,616	-				-0.1
2,010,774	-		ABIE53_005711	0.11	-3.2
2,010,864	-		ABIE53_005711	0.19	-1.3
2,010,864	-		ABIE53_005711	0.19	-2.0
2,010,864	-		ABIE53_005711	0.19	+0.5
2,010,902	+		ABIE53_005711	0.22	+3.5
2,010,920	+		ABIE53_005711	0.24	-0.9
2,011,040	+		ABIE53_005711	0.35	-3.6
2,011,041	-		ABIE53_005711	0.35	+1.5
2,011,146	-		ABIE53_005711	0.44	+0.5
2,011,191	-		ABIE53_005711	0.49	+0.5
2,011,191	-		ABIE53_005711	0.49	-0.1
2,011,191	-		ABIE53_005711	0.49	+1.5
2,011,206	+		ABIE53_005711	0.50	-2.1
2,011,207	-		ABIE53_005711	0.50	-1.9
2,011,307	+		ABIE53_005711	0.59	+1.1
2,011,346	+		ABIE53_005711	0.63	-1.5
2,011,347	-		ABIE53_005711	0.63	+0.5
2,011,352	+		ABIE53_005711	0.63	+0.5
2,011,353	-		ABIE53_005711	0.63	-2.9
2,011,353	-		ABIE53_005711	0.63	+1.5
2,011,353	-		ABIE53_005711	0.63	+0.9