Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_005050

Experiment: Acetylated xylan 10 g/L (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetylated xylan 10 g/L (C)
1,292,304	+		ABIE53_005049	0.13	+1.4
1,292,305	-		ABIE53_005049	0.13	-1.7
1,292,305	-		ABIE53_005049	0.13	-2.2
1,292,566	-		ABIE53_005049	0.39	-0.2
1,292,566	-		ABIE53_005049	0.39	-0.2
1,292,567	+		ABIE53_005049	0.39	-0.2
1,292,567	+		ABIE53_005049	0.39	-2.2
1,292,567	+		ABIE53_005049	0.39	-1.2
1,292,567	+		ABIE53_005049	0.39	+0.4
1,292,567	+		ABIE53_005049	0.39	-1.4
1,292,568	-		ABIE53_005049	0.39	-1.9
1,292,789	+		ABIE53_005049	0.61	-2.1
1,292,789	+		ABIE53_005049	0.61	-0.0
1,292,789	+		ABIE53_005049	0.61	-1.9
1,292,790	-		ABIE53_005049	0.61	-2.4
1,292,930	+		ABIE53_005049	0.75	-0.9
1,292,931	-		ABIE53_005049	0.75	-1.4
1,292,931	-		ABIE53_005049	0.75	+0.4
1,293,278	+		ABIE53_005050	0.11	+1.4
1,293,279	-		ABIE53_005050	0.11	+0.0
1,293,279	-		ABIE53_005050	0.11	+1.9
1,293,364	+		ABIE53_005050	0.25	+1.4
1,293,364	+		ABIE53_005050	0.25	-1.2
1,293,364	+		ABIE53_005050	0.25	-2.1
1,293,365	-		ABIE53_005050	0.25	-1.2
1,293,449	-		ABIE53_005050	0.39	-2.7
1,293,554	+		ABIE53_005050	0.55	-2.6
1,293,554	+		ABIE53_005050	0.55	+1.4
1,293,555	-		ABIE53_005050	0.56	-0.7
1,293,602	+		ABIE53_005050	0.63	+2.6
1,293,602	+		ABIE53_005050	0.63	+0.4
1,293,602	+		ABIE53_005050	0.63	+2.4
1,293,603	-		ABIE53_005050	0.63	+2.2
1,293,603	-		ABIE53_005050	0.63	+1.4
1,293,603	-		ABIE53_005050	0.63	+2.9
1,293,799	-				-1.2
1,293,800	+				+0.4
1,293,831	+				+1.4
1,293,831	+				+2.4
1,293,831	+				+0.4
1,293,831	+				-2.0
1,293,831	+				+0.4
1,293,831	+				+1.4
1,294,013	-				+0.0
1,294,018	+				-0.2
1,294,047	+				+1.4
1,294,102	+				+1.4
1,294,103	-				+1.4
1,294,182	-		ABIE53_005051	0.71	+0.9
1,294,182	-		ABIE53_005051	0.71	+0.4
1,294,203	-		ABIE53_005051	0.89	-0.2
1,294,299	+				+0.0
1,294,299	+				+1.4
1,294,299	+				+0.4
1,294,299	+				-1.4
1,294,299	+				+1.4
1,294,299	+				+0.4
1,294,299	+				+0.4
1,294,299	+				-0.2
1,294,300	-				+1.4
1,294,300	-				-2.0
1,294,300	-				-1.6
1,294,300	-				+0.4
1,294,300	-				+0.4
1,294,300	-				+1.4
1,294,300	-				-0.6
1,294,300	-				-0.2
1,294,300	-				-3.6
1,294,300	-				+0.4
1,294,300	-				+0.0
1,294,300	-				+0.4
1,294,300	-				+1.4
1,294,300	-				+1.4
1,294,303	-				+0.8
1,294,303	-				-0.1
1,294,509	+				-1.1
1,294,509	+				-1.0
1,294,509	+				-0.6
1,294,509	+				+1.4
1,294,509	+				+0.4
1,294,636	+				-1.8
1,294,636	+				-0.8
1,294,636	+				-1.4
1,294,693	-				-1.5
1,294,715	-				-2.2
1,294,715	-				+1.3
1,294,715	-				+0.4
1,294,796	+		ABIE53_005052	0.14	-1.3