Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_005047

Experiment: Acetylated xylan 10 g/L (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetylated xylan 10 g/L (C)
1,289,204	+		ABIE53_005045	0.34	+1.4
1,289,896	-				-2.0
1,289,896	-				+1.4
1,289,934	-				+1.4
1,289,934	-				+0.4
1,289,971	+				+1.9
1,289,971	+				-2.3
1,290,155	-		ABIE53_005047	0.87	+0.4
1,290,235	-				+0.4
1,290,267	+				+1.4
1,290,267	+				+1.4
1,290,268	-				-0.2
1,290,268	-				+0.0
1,290,308	+				+1.4
1,290,585	+		ABIE53_005048	0.10	+0.4
1,290,586	-		ABIE53_005048	0.10	-0.6
1,290,786	+		ABIE53_005048	0.23	+0.4
1,290,786	+		ABIE53_005048	0.23	-2.2
1,290,786	+		ABIE53_005048	0.23	-1.3
1,290,786	+		ABIE53_005048	0.23	+1.2
1,290,843	+		ABIE53_005048	0.26	-2.5
1,290,944	+		ABIE53_005048	0.33	-2.1
1,290,944	+		ABIE53_005048	0.33	-0.9
1,290,944	+		ABIE53_005048	0.33	-0.6
1,290,944	+		ABIE53_005048	0.33	-0.5
1,290,945	-		ABIE53_005048	0.33	-1.2
1,290,945	-		ABIE53_005048	0.33	+0.4