Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_003965

Experiment: Acetylated xylan 10 g/L (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetylated xylan 10 g/L (C)
116,803	+				+1.4
116,804	-				-2.9
116,808	-				-2.2
116,814	-				-1.6
116,814	-				-0.2
116,814	-				-2.7
116,876	+		ABIE53_003964	0.13	+1.4
116,877	-		ABIE53_003964	0.13	-1.1
116,877	-		ABIE53_003964	0.13	+1.0
116,877	-		ABIE53_003964	0.13	+0.4
117,047	-		ABIE53_003964	0.52	-0.5
117,070	-		ABIE53_003964	0.58	-1.2
117,071	+		ABIE53_003964	0.58	-1.2
117,257	-				+0.4
117,349	+				+1.4
117,361	-				-0.6
117,610	+				+1.4
117,611	-				+0.4
117,662	+				+1.4
117,662	+				+0.4
117,662	+				-0.2
117,663	-				+0.4
117,663	-				-2.8
117,663	-				+1.4
117,962	+		ABIE53_003965	0.32	+0.6
117,963	-		ABIE53_003965	0.32	-3.2
118,073	+		ABIE53_003965	0.43	-2.2
118,074	-		ABIE53_003965	0.44	+1.4
118,244	+		ABIE53_003965	0.61	-1.4
118,244	+		ABIE53_003965	0.61	-1.8
118,930	+		ABIE53_003966	0.19	+1.4
119,155	+		ABIE53_003966	0.33	+0.8
119,155	+		ABIE53_003966	0.33	-1.2
119,241	+		ABIE53_003966	0.38	+3.7
119,242	-		ABIE53_003966	0.38	+2.4
119,325	+		ABIE53_003966	0.43	-1.4
119,338	+		ABIE53_003966	0.44	+0.6
119,339	-		ABIE53_003966	0.44	+0.4
119,378	-		ABIE53_003966	0.46	+3.4
119,378	-		ABIE53_003966	0.46	-2.6
119,378	-		ABIE53_003966	0.46	+1.4
119,438	+		ABIE53_003966	0.50	+1.4
119,610	+		ABIE53_003966	0.61	-0.6
119,611	-		ABIE53_003966	0.61	+1.4
119,611	-		ABIE53_003966	0.61	-0.2