Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_001825

Experiment: Laminarin 10 g/L (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Laminarin 10 g/L (C)
2,061,850	+		ABIE53_001824	0.34	-0.9
2,061,850	+		ABIE53_001824	0.34	-0.2
2,061,850	+		ABIE53_001824	0.34	+1.1
2,061,850	+		ABIE53_001824	0.34	+0.1
2,061,850	+		ABIE53_001824	0.34	-0.6
2,061,850	+		ABIE53_001824	0.34	+1.0
2,061,850	+		ABIE53_001824	0.34	-0.3
2,061,850	+		ABIE53_001824	0.34	-1.5
2,061,850	+		ABIE53_001824	0.34	+2.1
2,061,851	-		ABIE53_001824	0.34	+1.1
2,061,851	-		ABIE53_001824	0.34	-0.3
2,061,851	-		ABIE53_001824	0.34	+0.1
2,061,851	-		ABIE53_001824	0.34	+0.9
2,061,851	-		ABIE53_001824	0.34	+1.1
2,061,851	-		ABIE53_001824	0.34	-2.7
2,061,851	-		ABIE53_001824	0.34	-1.2
2,061,858	+		ABIE53_001824	0.34	-1.2
2,061,859	-		ABIE53_001824	0.35	+0.5
2,061,859	-		ABIE53_001824	0.35	+1.1
2,061,898	+		ABIE53_001824	0.37	-1.2
2,061,898	+		ABIE53_001824	0.37	-0.7
2,061,898	+		ABIE53_001824	0.37	-1.2
2,061,898	+		ABIE53_001824	0.37	-2.6
2,061,898	+		ABIE53_001824	0.37	-1.2
2,061,899	-		ABIE53_001824	0.37	-1.2
2,061,899	-		ABIE53_001824	0.37	+0.8
2,061,899	-		ABIE53_001824	0.37	+1.1
2,062,093	+		ABIE53_001824	0.50	-1.2
2,062,276	+		ABIE53_001824	0.62	+1.5
2,062,277	-		ABIE53_001824	0.62	-2.3
2,062,288	+		ABIE53_001824	0.62	+1.4
2,062,288	+		ABIE53_001824	0.62	+2.1
2,062,288	+		ABIE53_001824	0.62	-0.2
2,062,288	+		ABIE53_001824	0.62	+0.6
2,062,289	-		ABIE53_001824	0.62	+0.2
2,062,289	-		ABIE53_001824	0.62	+0.1
2,062,289	-		ABIE53_001824	0.62	-0.5
2,062,486	+		ABIE53_001824	0.75	+1.1
2,062,486	+		ABIE53_001824	0.75	+0.4
2,062,487	-		ABIE53_001824	0.75	+1.7
2,062,487	-		ABIE53_001824	0.75	-2.7
2,062,487	-		ABIE53_001824	0.75	+2.7
2,062,660	+		ABIE53_001824	0.86	+0.7
2,062,660	+		ABIE53_001824	0.86	+2.0
2,062,660	+		ABIE53_001824	0.86	+1.7
2,062,660	+		ABIE53_001824	0.86	-0.2
2,062,661	-		ABIE53_001824	0.86	+3.7
2,062,661	-		ABIE53_001824	0.86	-0.2
2,062,661	-		ABIE53_001824	0.86	-0.5
2,062,661	-		ABIE53_001824	0.86	-0.6
2,062,661	-		ABIE53_001824	0.86	+0.1
2,062,661	-		ABIE53_001824	0.86	+1.4
2,062,661	-		ABIE53_001824	0.86	-1.6
2,062,661	-		ABIE53_001824	0.86	+1.1
2,062,703	+				-0.5
2,062,703	+				+0.1
2,062,703	+				-0.2
2,062,703	+				+1.4
2,062,703	+				+0.4
2,062,703	+				+1.2
2,062,703	+				-0.2
2,062,703	+				+0.8
2,062,703	+				+2.7
2,062,703	+				-0.7
2,062,703	+				+2.7
2,062,703	+				+3.1
2,062,703	+				+2.7
2,062,703	+				-1.1
2,062,703	+				+0.3
2,062,704	-				+1.1
2,062,704	-				+0.6
2,062,704	-				-1.7
2,062,704	-				+0.4
2,062,704	-				-0.3
2,062,704	-				-0.7
2,062,704	-				-0.0
2,062,704	-				+0.1
2,062,704	-				-0.6
2,062,704	-				+1.0
2,062,704	-				-0.9
2,062,704	-				-0.9
2,062,704	-				-1.7
2,062,704	-				-0.2
2,062,704	-				+1.1
2,062,704	-				+0.1
2,062,704	-				-0.5
2,062,704	-				+1.1
2,062,704	-				+1.1
2,062,792	+				+0.5
2,062,792	+				+0.1
2,062,792	+				+2.7
2,062,792	+				+0.6
2,062,793	-				+2.1
2,062,793	-				-1.7
2,062,793	-				+0.0
2,062,867	+				+1.1
2,062,867	+				+1.4
2,062,867	+				+0.1
2,062,867	+				+1.1
2,062,867	+				+1.3
2,062,868	-				+1.1
2,062,868	-				+1.7
2,062,868	-				+2.7
2,062,868	-				+0.6
2,062,868	-				-0.2
2,062,868	-				+2.3
2,062,941	+		ABIE53_001825	0.72	-0.5
2,062,941	+		ABIE53_001825	0.72	-0.5
2,062,941	+		ABIE53_001825	0.72	+1.1
2,062,941	+		ABIE53_001825	0.72	+0.1
2,062,942	-		ABIE53_001825	0.73	-1.8
2,062,942	-		ABIE53_001825	0.73	+1.7
2,062,942	-		ABIE53_001825	0.73	+1.1
2,062,942	-		ABIE53_001825	0.73	+2.7
2,062,942	-		ABIE53_001825	0.73	-2.0
2,063,013	+				-0.3
2,063,013	+				-0.9
2,063,016	+				-1.1
2,063,016	+				+1.1
2,063,016	+				+0.5
2,063,016	+				-0.8
2,063,049	+				+0.7
2,063,082	+				+0.2
2,063,082	+				+1.7
2,063,121	+				+0.3
2,063,121	+				-1.0
2,063,121	+				+1.1
2,063,121	+				+2.7
2,063,121	+				-0.1
2,063,203	+				+1.1
2,063,203	+				+0.2
2,063,203	+				-0.4
2,063,203	+				+2.5
2,063,203	+				+1.8
2,064,024	+		ABIE53_001826	0.70	+1.7
2,064,024	+		ABIE53_001826	0.70	-0.7
2,064,024	+		ABIE53_001826	0.70	+0.5
2,064,024	+		ABIE53_001826	0.70	+1.6
2,064,024	+		ABIE53_001826	0.70	+0.1
2,064,024	+		ABIE53_001826	0.70	+0.2
2,064,024	+		ABIE53_001826	0.70	+0.8