Experiment: Pyruvate (fermenting) with Na2S as sulfur source + 0.1% Yeast Extract
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0164 and oppF are separated by 284 nucleotides oppF and oppD are separated by 10 nucleotides oppD and oppC are separated by 2 nucleotides
DVU0164: DVU0164 - cation efflux family protein (TIGR), at 204,157 to 205,065
DVU0164
DVU0165: oppF - oligopeptide/dipeptide ABC transporter, ATP-binding protein (TIGR), at 205,350 to 206,363
oppF
DVU0166: oppD - oligopeptide/dipeptide ABC transporter, ATP-binding protein (TIGR), at 206,374 to 207,360
oppD
DVU0167: oppC - oligopeptide/dipeptide ABC transporter, permease protein (TIGR), at 207,363 to 208,283
oppC
Position (kb) 205
206
207 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 204.355 kb on - strand, within DVU0164 at 204.491 kb on + strand, within DVU0164 at 204.499 kb on - strand, within DVU0164 at 204.504 kb on - strand, within DVU0164 at 204.505 kb on + strand, within DVU0164 at 204.513 kb on - strand, within DVU0164 at 204.551 kb on + strand, within DVU0164 at 204.580 kb on - strand, within DVU0164 at 204.696 kb on + strand, within DVU0164 at 204.706 kb on - strand, within DVU0164 at 204.722 kb on - strand, within DVU0164 at 204.732 kb on - strand, within DVU0164 at 204.732 kb on - strand, within DVU0164 at 204.788 kb on - strand, within DVU0164 at 204.922 kb on - strand, within DVU0164 at 204.931 kb on - strand, within DVU0164 at 204.958 kb on - strand, within DVU0164 at 204.979 kb on - strand at 205.008 kb on - strand at 205.018 kb on + strand at 205.031 kb on - strand at 205.061 kb on + strand at 205.061 kb on + strand at 205.088 kb on - strand at 205.156 kb on + strand at 205.168 kb on + strand at 205.184 kb on + strand at 205.197 kb on - strand at 205.203 kb on + strand at 205.211 kb on + strand at 205.334 kb on + strand at 205.349 kb on + strand at 205.401 kb on - strand at 205.411 kb on + strand at 205.558 kb on - strand, within oppF at 205.601 kb on + strand, within oppF at 205.601 kb on + strand, within oppF at 205.626 kb on + strand, within oppF at 205.656 kb on + strand, within oppF at 205.718 kb on + strand, within oppF at 205.718 kb on + strand, within oppF at 205.774 kb on - strand, within oppF at 205.780 kb on - strand, within oppF at 205.852 kb on - strand, within oppF at 205.852 kb on - strand, within oppF at 205.867 kb on + strand, within oppF at 205.891 kb on + strand, within oppF at 205.891 kb on + strand, within oppF at 205.937 kb on - strand, within oppF at 206.020 kb on + strand, within oppF at 206.085 kb on - strand, within oppF at 206.165 kb on + strand, within oppF at 206.281 kb on + strand at 206.402 kb on - strand at 206.425 kb on - strand at 206.446 kb on - strand at 206.450 kb on + strand at 206.498 kb on + strand, within oppD at 206.498 kb on + strand, within oppD at 206.553 kb on - strand, within oppD at 206.560 kb on + strand, within oppD at 206.560 kb on + strand, within oppD at 206.609 kb on + strand, within oppD at 206.609 kb on + strand, within oppD at 206.609 kb on + strand, within oppD at 206.609 kb on + strand, within oppD at 206.617 kb on - strand, within oppD at 206.630 kb on + strand, within oppD at 206.638 kb on - strand, within oppD at 206.653 kb on + strand, within oppD at 206.653 kb on - strand, within oppD at 206.741 kb on - strand, within oppD at 206.742 kb on - strand, within oppD at 206.761 kb on - strand, within oppD at 206.811 kb on - strand, within oppD at 206.846 kb on + strand, within oppD at 206.851 kb on + strand, within oppD at 206.856 kb on + strand, within oppD at 206.856 kb on - strand, within oppD at 206.864 kb on - strand, within oppD at 206.907 kb on - strand, within oppD at 206.913 kb on + strand, within oppD at 206.930 kb on + strand, within oppD at 206.938 kb on + strand, within oppD at 206.938 kb on + strand, within oppD at 206.938 kb on + strand, within oppD at 206.938 kb on + strand, within oppD at 206.946 kb on - strand, within oppD at 206.993 kb on + strand, within oppD at 207.156 kb on - strand, within oppD at 207.156 kb on - strand, within oppD at 207.192 kb on + strand, within oppD at 207.228 kb on + strand, within oppD
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate (fermenting) with Na2S as sulfur source + 0.1% Yeast Extract remove 204,355 - DVU0164 0.22 -2.3 204,491 + DVU0164 0.37 +0.1 204,499 - DVU0164 0.38 -0.1 204,504 - DVU0164 0.38 +0.1 204,505 + DVU0164 0.38 -0.3 204,513 - DVU0164 0.39 +0.3 204,551 + DVU0164 0.43 -0.1 204,580 - DVU0164 0.47 -0.3 204,696 + DVU0164 0.59 -0.1 204,706 - DVU0164 0.60 -0.3 204,722 - DVU0164 0.62 +0.4 204,732 - DVU0164 0.63 -0.0 204,732 - DVU0164 0.63 +0.1 204,788 - DVU0164 0.69 +0.0 204,922 - DVU0164 0.84 +0.3 204,931 - DVU0164 0.85 -0.4 204,958 - DVU0164 0.88 +2.8 204,979 - -0.2 205,008 - +0.0 205,018 + -2.0 205,031 - -0.2 205,061 + +1.4 205,061 + -0.5 205,088 - +0.3 205,156 + -0.1 205,168 + +0.5 205,184 + -1.7 205,197 - -0.8 205,203 + -0.0 205,211 + +0.0 205,334 + -0.2 205,349 + -0.3 205,401 - +0.1 205,411 + -0.8 205,558 - oppF DVU0165 0.21 -0.2 205,601 + oppF DVU0165 0.25 +0.9 205,601 + oppF DVU0165 0.25 -0.4 205,626 + oppF DVU0165 0.27 -0.6 205,656 + oppF DVU0165 0.30 -2.0 205,718 + oppF DVU0165 0.36 -0.0 205,718 + oppF DVU0165 0.36 -1.8 205,774 - oppF DVU0165 0.42 -2.6 205,780 - oppF DVU0165 0.42 -1.6 205,852 - oppF DVU0165 0.50 -0.1 205,852 - oppF DVU0165 0.50 -0.8 205,867 + oppF DVU0165 0.51 -0.3 205,891 + oppF DVU0165 0.53 -0.1 205,891 + oppF DVU0165 0.53 -0.2 205,937 - oppF DVU0165 0.58 +0.6 206,020 + oppF DVU0165 0.66 -0.6 206,085 - oppF DVU0165 0.72 +0.5 206,165 + oppF DVU0165 0.80 -1.6 206,281 + -1.9 206,402 - +0.0 206,425 - -0.6 206,446 - -0.6 206,450 + -0.3 206,498 + oppD DVU0166 0.13 +0.3 206,498 + oppD DVU0166 0.13 -0.1 206,553 - oppD DVU0166 0.18 -0.7 206,560 + oppD DVU0166 0.19 -0.1 206,560 + oppD DVU0166 0.19 -1.0 206,609 + oppD DVU0166 0.24 -0.5 206,609 + oppD DVU0166 0.24 -0.0 206,609 + oppD DVU0166 0.24 -1.2 206,609 + oppD DVU0166 0.24 +0.4 206,617 - oppD DVU0166 0.25 -1.4 206,630 + oppD DVU0166 0.26 +0.2 206,638 - oppD DVU0166 0.27 +1.5 206,653 + oppD DVU0166 0.28 -1.6 206,653 - oppD DVU0166 0.28 -0.3 206,741 - oppD DVU0166 0.37 -0.8 206,742 - oppD DVU0166 0.37 +0.6 206,761 - oppD DVU0166 0.39 -0.4 206,811 - oppD DVU0166 0.44 -0.0 206,846 + oppD DVU0166 0.48 -0.5 206,851 + oppD DVU0166 0.48 -0.2 206,856 + oppD DVU0166 0.49 -2.1 206,856 - oppD DVU0166 0.49 -0.3 206,864 - oppD DVU0166 0.50 -0.5 206,907 - oppD DVU0166 0.54 -0.2 206,913 + oppD DVU0166 0.55 -0.2 206,930 + oppD DVU0166 0.56 -0.1 206,938 + oppD DVU0166 0.57 +1.9 206,938 + oppD DVU0166 0.57 -0.2 206,938 + oppD DVU0166 0.57 +0.9 206,938 + oppD DVU0166 0.57 -0.2 206,946 - oppD DVU0166 0.58 -2.6 206,993 + oppD DVU0166 0.63 -0.0 207,156 - oppD DVU0166 0.79 -1.6 207,156 - oppD DVU0166 0.79 -0.5 207,192 + oppD DVU0166 0.83 -0.4 207,228 + oppD DVU0166 0.87 +0.5
Or see this region's nucleotide sequence