Experiment: KB with Totarol 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4938 and Psyr_4939 overlap by 14 nucleotides Psyr_4939 and Psyr_4940 are separated by 547 nucleotides
Psyr_4938: Psyr_4938 - Helix-turn-helix, Fis-type, at 5,853,956 to 5,855,347
_4938
Psyr_4939: Psyr_4939 - conserved hypothetical protein, at 5,855,334 to 5,855,807
_4939
Psyr_4940: Psyr_4940 - 3'(2'),5'-bisphosphate nucleotidase, at 5,856,355 to 5,857,197
_4940
Position (kb) 5855
5856 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5854.694 kb on - strand, within Psyr_4938 at 5854.883 kb on + strand, within Psyr_4938 at 5854.883 kb on + strand, within Psyr_4938 at 5854.883 kb on + strand, within Psyr_4938 at 5854.883 kb on + strand, within Psyr_4938 at 5854.883 kb on + strand, within Psyr_4938 at 5854.883 kb on + strand, within Psyr_4938 at 5854.883 kb on + strand, within Psyr_4938 at 5854.883 kb on + strand, within Psyr_4938 at 5854.883 kb on + strand, within Psyr_4938 at 5854.884 kb on - strand, within Psyr_4938 at 5854.884 kb on - strand, within Psyr_4938 at 5854.884 kb on - strand, within Psyr_4938 at 5854.884 kb on - strand, within Psyr_4938 at 5854.884 kb on - strand, within Psyr_4938 at 5854.884 kb on - strand, within Psyr_4938 at 5854.884 kb on - strand, within Psyr_4938 at 5854.964 kb on + strand, within Psyr_4938 at 5854.965 kb on - strand, within Psyr_4938 at 5854.965 kb on - strand, within Psyr_4938 at 5855.044 kb on + strand, within Psyr_4938 at 5855.044 kb on + strand, within Psyr_4938 at 5855.044 kb on + strand, within Psyr_4938 at 5855.045 kb on - strand, within Psyr_4938 at 5855.045 kb on - strand, within Psyr_4938 at 5855.045 kb on - strand, within Psyr_4938 at 5855.045 kb on - strand, within Psyr_4938 at 5855.517 kb on + strand, within Psyr_4939 at 5855.517 kb on + strand, within Psyr_4939 at 5855.518 kb on - strand, within Psyr_4939 at 5855.591 kb on + strand, within Psyr_4939 at 5855.592 kb on - strand, within Psyr_4939 at 5855.592 kb on - strand, within Psyr_4939 at 5855.700 kb on + strand, within Psyr_4939 at 5855.701 kb on - strand, within Psyr_4939 at 5855.868 kb on - strand at 5855.899 kb on + strand at 5855.900 kb on - strand at 5855.900 kb on - strand at 5855.900 kb on - strand at 5855.951 kb on + strand at 5856.142 kb on + strand at 5856.142 kb on + strand at 5856.142 kb on + strand at 5856.142 kb on + strand at 5856.143 kb on - strand at 5856.143 kb on - strand at 5856.143 kb on - strand at 5856.143 kb on - strand at 5856.143 kb on - strand at 5856.143 kb on - strand at 5856.143 kb on - strand at 5856.149 kb on - strand at 5856.177 kb on - strand at 5856.220 kb on + strand at 5856.321 kb on + strand at 5856.321 kb on + strand at 5856.321 kb on + strand at 5856.321 kb on + strand at 5856.322 kb on - strand at 5856.797 kb on + strand, within Psyr_4940 at 5856.798 kb on - strand, within Psyr_4940 at 5856.798 kb on - strand, within Psyr_4940
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Totarol 10 mM remove 5,854,694 - Psyr_4938 0.53 -0.8 5,854,883 + Psyr_4938 0.67 -0.5 5,854,883 + Psyr_4938 0.67 -1.1 5,854,883 + Psyr_4938 0.67 -2.2 5,854,883 + Psyr_4938 0.67 -0.2 5,854,883 + Psyr_4938 0.67 -1.5 5,854,883 + Psyr_4938 0.67 -1.2 5,854,883 + Psyr_4938 0.67 -0.4 5,854,883 + Psyr_4938 0.67 -0.1 5,854,883 + Psyr_4938 0.67 -1.4 5,854,884 - Psyr_4938 0.67 +0.3 5,854,884 - Psyr_4938 0.67 +0.1 5,854,884 - Psyr_4938 0.67 -1.2 5,854,884 - Psyr_4938 0.67 +1.5 5,854,884 - Psyr_4938 0.67 -1.6 5,854,884 - Psyr_4938 0.67 -0.2 5,854,884 - Psyr_4938 0.67 +1.1 5,854,964 + Psyr_4938 0.72 -1.0 5,854,965 - Psyr_4938 0.72 +0.5 5,854,965 - Psyr_4938 0.72 +0.0 5,855,044 + Psyr_4938 0.78 +0.5 5,855,044 + Psyr_4938 0.78 -1.3 5,855,044 + Psyr_4938 0.78 -0.8 5,855,045 - Psyr_4938 0.78 +1.6 5,855,045 - Psyr_4938 0.78 +0.9 5,855,045 - Psyr_4938 0.78 +1.2 5,855,045 - Psyr_4938 0.78 -1.3 5,855,517 + Psyr_4939 0.39 -0.7 5,855,517 + Psyr_4939 0.39 -0.3 5,855,518 - Psyr_4939 0.39 -0.4 5,855,591 + Psyr_4939 0.54 -2.2 5,855,592 - Psyr_4939 0.54 +2.9 5,855,592 - Psyr_4939 0.54 -1.0 5,855,700 + Psyr_4939 0.77 -0.3 5,855,701 - Psyr_4939 0.77 -0.2 5,855,868 - -2.0 5,855,899 + +0.6 5,855,900 - +0.5 5,855,900 - -0.6 5,855,900 - +1.1 5,855,951 + +0.7 5,856,142 + -0.4 5,856,142 + +2.1 5,856,142 + -0.5 5,856,142 + -1.0 5,856,143 - -1.3 5,856,143 - -0.3 5,856,143 - +0.4 5,856,143 - -2.5 5,856,143 - -0.0 5,856,143 - +0.3 5,856,143 - -0.1 5,856,149 - -0.0 5,856,177 - -0.3 5,856,220 + +1.1 5,856,321 + +0.5 5,856,321 + +0.7 5,856,321 + +0.3 5,856,321 + +0.8 5,856,322 - -0.5 5,856,797 + Psyr_4940 0.52 -1.3 5,856,798 - Psyr_4940 0.53 +0.2 5,856,798 - Psyr_4940 0.53 -0.5
Or see this region's nucleotide sequence