Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1263

Experiment: KB with Totarol 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Totarol 10 mM
1,421,350	-				-0.8
1,421,426	+				-0.6
1,421,476	+				+0.7
1,421,495	+				-0.1
1,421,496	-				+0.0
1,421,520	+				+1.3
1,421,530	+				+1.4
1,421,531	-				-0.3
1,421,531	-				+4.0
1,421,569	+				+1.2
1,421,570	-				+0.6
1,421,578	+				+1.4
1,421,578	+				-0.1
1,421,578	+				+0.4
1,421,578	+				+0.4
1,421,578	+				+0.8
1,421,578	+				+0.8
1,421,578	+				-1.6
1,421,579	-				-1.1
1,421,579	-				-0.1
1,421,579	-				+2.2
1,421,579	-				+0.1
1,421,579	-				+0.2
1,421,579	-				-1.0
1,421,579	-				-0.2
1,421,579	-				-0.8
1,421,580	+				+0.1
1,421,581	-				-0.1
1,421,581	-				-0.5
1,421,608	+				+0.4
1,421,608	+				+0.1
1,421,609	-				-0.3
1,421,610	+				-0.3
1,421,610	+				+0.7
1,421,611	-				-1.6
1,421,611	-				-0.7
1,421,611	-				+0.7
1,421,611	-				+1.5
1,421,691	+				+1.4
1,421,691	+				+0.4
1,421,691	+				+1.0
1,421,738	+				+0.2
1,421,738	+				-0.1
1,421,739	-				+2.4
1,421,747	+				+0.2
1,421,762	+				-0.7
1,421,763	-				+0.1
1,421,763	-				-0.2
1,421,763	-				-0.0
1,421,763	-				-0.2
1,421,814	+				-1.4
1,421,815	-				-0.5
1,421,847	+		Psyr_1263	0.10	-1.1
1,421,847	+		Psyr_1263	0.10	-1.1
1,421,847	+		Psyr_1263	0.10	-0.8
1,421,848	-		Psyr_1263	0.10	-0.5
1,421,848	-		Psyr_1263	0.10	-0.5
1,421,929	-		Psyr_1263	0.12	-1.9
1,421,935	+		Psyr_1263	0.12	-0.5
1,421,935	+		Psyr_1263	0.12	-0.4
1,422,008	-		Psyr_1263	0.14	-3.1
1,422,008	-		Psyr_1263	0.14	-0.2
1,422,008	-		Psyr_1263	0.14	+1.0
1,422,018	+		Psyr_1263	0.14	+0.9
1,422,018	+		Psyr_1263	0.14	+1.8
1,422,018	+		Psyr_1263	0.14	+0.3
1,422,019	-		Psyr_1263	0.14	+0.3
1,422,149	+		Psyr_1263	0.17	+0.3
1,422,150	-		Psyr_1263	0.17	-0.1
1,422,150	-		Psyr_1263	0.17	-0.6
1,422,150	-		Psyr_1263	0.17	-0.2
1,422,150	-		Psyr_1263	0.17	-1.6
1,422,255	+		Psyr_1263	0.19	-0.4
1,422,255	+		Psyr_1263	0.19	-0.6
1,422,255	+		Psyr_1263	0.19	+0.8
1,422,255	+		Psyr_1263	0.19	-0.3
1,422,255	+		Psyr_1263	0.19	+0.4
1,422,256	-		Psyr_1263	0.19	-0.1
1,422,256	-		Psyr_1263	0.19	-0.6
1,422,257	+		Psyr_1263	0.19	-1.2
1,422,257	+		Psyr_1263	0.19	-0.7
1,422,257	+		Psyr_1263	0.19	+1.7
1,422,257	+		Psyr_1263	0.19	+1.7
1,422,257	+		Psyr_1263	0.19	+0.6
1,422,257	+		Psyr_1263	0.19	-0.5
1,422,257	+		Psyr_1263	0.19	-2.0
1,422,257	+		Psyr_1263	0.19	+0.6
1,422,257	+		Psyr_1263	0.19	-0.0
1,422,258	-		Psyr_1263	0.19	-0.8
1,422,258	-		Psyr_1263	0.19	+0.5
1,422,258	-		Psyr_1263	0.19	+2.8
1,422,258	-		Psyr_1263	0.19	+0.5
1,422,258	-		Psyr_1263	0.19	+1.0
1,422,258	-		Psyr_1263	0.19	-0.6
1,422,258	-		Psyr_1263	0.19	-0.8
1,422,258	-		Psyr_1263	0.19	+1.0
1,422,258	-		Psyr_1263	0.19	+1.5
1,422,426	+		Psyr_1263	0.23	-0.1
1,422,427	-		Psyr_1263	0.23	+0.2
1,422,436	-		Psyr_1263	0.23	-1.7
1,422,481	-		Psyr_1263	0.24	+1.2
1,422,527	+		Psyr_1263	0.25	+2.0
1,422,527	+		Psyr_1263	0.25	+1.0
1,422,528	-		Psyr_1263	0.25	+3.6
1,422,528	-		Psyr_1263	0.25	-1.1
1,422,645	+		Psyr_1263	0.27	+0.1
1,422,646	-		Psyr_1263	0.27	-0.1
1,422,656	+		Psyr_1263	0.27	-0.0
1,422,656	+		Psyr_1263	0.27	-0.3
1,422,656	+		Psyr_1263	0.27	-0.2
1,422,656	+		Psyr_1263	0.27	+0.4
1,422,657	-		Psyr_1263	0.27	-0.1
1,422,657	-		Psyr_1263	0.27	+0.1
1,422,708	+		Psyr_1263	0.29	+1.4
1,422,709	-		Psyr_1263	0.29	-0.5
1,422,731	+				-1.6
1,422,732	-		Psyr_1263	0.29	-1.2
1,422,732	-		Psyr_1263	0.29	-1.2
1,422,732	-		Psyr_1263	0.29	-1.2
1,422,734	+		Psyr_1263	0.29	+1.2
1,422,734	+		Psyr_1263	0.29	+1.7
1,422,735	-		Psyr_1263	0.29	-1.7
1,422,735	-		Psyr_1263	0.29	+3.8
1,422,735	-		Psyr_1263	0.29	+2.8
1,422,735	-		Psyr_1263	0.29	-0.2
1,422,735	-		Psyr_1263	0.29	+0.4
1,422,735	-		Psyr_1263	0.29	-0.2
1,422,811	-		Psyr_1263	0.31	-0.0
1,422,811	-		Psyr_1263	0.31	+0.4
1,422,815	+		Psyr_1263	0.31	+0.5
1,422,831	+		Psyr_1263	0.31	+0.2
1,422,831	+		Psyr_1263	0.31	-0.6
1,422,831	+		Psyr_1263	0.31	-0.4
1,422,849	+		Psyr_1263	0.32	-2.4
1,422,849	+		Psyr_1263	0.32	+1.4
1,422,850	-		Psyr_1263	0.32	-0.1
1,422,850	-		Psyr_1263	0.32	+0.7
1,422,850	-		Psyr_1263	0.32	+0.6
1,422,851	+		Psyr_1263	0.32	+1.2
1,422,851	+		Psyr_1263	0.32	+0.2
1,422,851	+		Psyr_1263	0.32	+0.2
1,422,851	+		Psyr_1263	0.32	+0.2
1,422,851	+		Psyr_1263	0.32	+0.2
1,422,851	+		Psyr_1263	0.32	-0.7
1,422,852	-		Psyr_1263	0.32	+0.4
1,422,853	+		Psyr_1263	0.32	-0.0
1,422,853	+		Psyr_1263	0.32	-1.7
1,422,853	+		Psyr_1263	0.32	-0.7
1,422,853	+		Psyr_1263	0.32	-0.6
1,422,853	+		Psyr_1263	0.32	+1.0
1,422,853	+		Psyr_1263	0.32	-0.7
1,422,853	+		Psyr_1263	0.32	-0.4
1,422,853	+		Psyr_1263	0.32	-0.5
1,422,853	+		Psyr_1263	0.32	+0.2
1,422,853	+		Psyr_1263	0.32	+0.8
1,422,854	-		Psyr_1263	0.32	+0.1
1,422,854	-		Psyr_1263	0.32	+0.0
1,422,854	-		Psyr_1263	0.32	+0.7
1,422,854	-		Psyr_1263	0.32	+1.2
1,422,854	-		Psyr_1263	0.32	+0.5
1,422,854	-		Psyr_1263	0.32	-0.4
1,422,854	-		Psyr_1263	0.32	+2.6
1,422,854	-		Psyr_1263	0.32	-1.0
1,422,894	+		Psyr_1263	0.33	+0.7
1,422,908	+		Psyr_1263	0.33	-0.0
1,422,909	-		Psyr_1263	0.33	-1.8
1,422,935	+		Psyr_1263	0.33	-0.6
1,423,003	+		Psyr_1263	0.35	+0.3
1,423,003	+		Psyr_1263	0.35	+1.3
1,423,003	+		Psyr_1263	0.35	+0.9
1,423,003	+		Psyr_1263	0.35	+0.4
1,423,004	-		Psyr_1263	0.35	-0.2
1,423,030	+		Psyr_1263	0.35	-0.6
1,423,030	+		Psyr_1263	0.35	-0.0
1,423,030	+		Psyr_1263	0.35	-0.2
1,423,030	+		Psyr_1263	0.35	+0.1
1,423,033	+		Psyr_1263	0.35	+0.2
1,423,033	+		Psyr_1263	0.35	+0.9
1,423,033	+		Psyr_1263	0.35	+1.0
1,423,033	+		Psyr_1263	0.35	+0.4
1,423,033	+				+0.6
1,423,034	-		Psyr_1263	0.35	+0.7
1,423,034	-		Psyr_1263	0.35	-0.3
1,423,034	-		Psyr_1263	0.35	+1.6
1,423,034	-		Psyr_1263	0.35	-0.1
1,423,034	-		Psyr_1263	0.35	+0.9
1,423,046	-		Psyr_1263	0.36	-0.7
1,423,146	+		Psyr_1263	0.38	+0.0
1,423,180	+		Psyr_1263	0.39	+1.2
1,423,205	+		Psyr_1263	0.39	-0.6
1,423,206	-		Psyr_1263	0.39	-0.1
1,423,267	+		Psyr_1263	0.40	+2.0
1,423,267	+		Psyr_1263	0.40	+0.4
1,423,268	-		Psyr_1263	0.40	-1.1
1,423,268	-		Psyr_1263	0.40	-0.1
1,423,339	+		Psyr_1263	0.42	+0.3
1,423,339	+		Psyr_1263	0.42	-0.5
1,423,374	+		Psyr_1263	0.43	-0.8
1,423,375	-		Psyr_1263	0.43	-0.1
1,423,522	-		Psyr_1263	0.46	+1.0
1,423,535	+		Psyr_1263	0.46	-2.6
1,423,623	+		Psyr_1263	0.48	+0.4
1,423,682	+		Psyr_1263	0.49	+1.0
1,423,683	-		Psyr_1263	0.49	+1.1
1,423,683	-		Psyr_1263	0.49	-1.2
1,423,752	+		Psyr_1263	0.51	-0.2
1,423,829	-		Psyr_1263	0.52	-0.6
1,423,829	-		Psyr_1263	0.52	-0.5
1,423,862	+		Psyr_1263	0.53	-0.5
1,423,864	+		Psyr_1263	0.53	+0.2
1,423,864	+		Psyr_1263	0.53	+0.3
1,423,864	+		Psyr_1263	0.53	+0.2
1,423,865	-		Psyr_1263	0.53	-0.4
1,423,865	-		Psyr_1263	0.53	+1.7
1,423,901	+		Psyr_1263	0.54	-1.1
1,423,901	+		Psyr_1263	0.54	+1.3
1,423,901	+		Psyr_1263	0.54	+0.3
1,423,902	-		Psyr_1263	0.54	+0.6
1,423,902	-		Psyr_1263	0.54	-2.3
1,423,902	-		Psyr_1263	0.54	-1.9
1,423,902	-		Psyr_1263	0.54	+1.9
1,423,938	+		Psyr_1263	0.55	+0.3
1,423,938	+		Psyr_1263	0.55	-0.2
1,423,938	+		Psyr_1263	0.55	-1.3
1,423,938	+		Psyr_1263	0.55	+0.4
1,423,938	+		Psyr_1263	0.55	-2.1
1,423,938	+		Psyr_1263	0.55	+0.8
1,423,943	-		Psyr_1263	0.55	+0.3
1,423,956	-		Psyr_1263	0.55	-0.4
1,423,959	+		Psyr_1263	0.55	+0.6
1,423,960	-		Psyr_1263	0.55	+0.5
1,423,960	-		Psyr_1263	0.55	-0.8
1,423,960	-		Psyr_1263	0.55	+1.8
1,423,960	-		Psyr_1263	0.55	-0.7
1,423,960	-		Psyr_1263	0.55	+2.0
1,423,960	-		Psyr_1263	0.55	+0.4
1,423,960	-		Psyr_1263	0.55	+0.6
1,423,960	-		Psyr_1263	0.55	-0.5
1,423,960	-		Psyr_1263	0.55	+0.2
1,423,966	+		Psyr_1263	0.55	+1.7
1,423,967	-		Psyr_1263	0.55	+0.3
1,423,978	+		Psyr_1263	0.56	+0.7
1,423,978	+		Psyr_1263	0.56	-2.8
1,423,978	+		Psyr_1263	0.56	+1.6
1,423,979	-		Psyr_1263	0.56	+0.2
1,423,979	-		Psyr_1263	0.56	-0.4
1,424,051	+		Psyr_1263	0.57	-0.9
1,424,066	+		Psyr_1263	0.57	+0.6
1,424,066	+		Psyr_1263	0.57	-0.1
1,424,066	+		Psyr_1263	0.57	-0.2
1,424,066	+		Psyr_1263	0.57	-3.1
1,424,066	+		Psyr_1263	0.57	+0.5
1,424,067	-		Psyr_1263	0.57	-0.1
1,424,070	+		Psyr_1263	0.58	+1.0
1,424,070	+		Psyr_1263	0.58	-0.6
1,424,070	+		Psyr_1263	0.58	-0.1
1,424,070	+		Psyr_1263	0.58	-0.0
1,424,070	+		Psyr_1263	0.58	+0.9
1,424,070	+		Psyr_1263	0.58	-0.5
1,424,070	+		Psyr_1263	0.58	-0.8
1,424,070	+		Psyr_1263	0.58	+1.3
1,424,071	-		Psyr_1263	0.58	+0.2
1,424,071	-		Psyr_1263	0.58	-0.5
1,424,071	-		Psyr_1263	0.58	-0.4
1,424,071	-		Psyr_1263	0.58	-0.0
1,424,073	+		Psyr_1263	0.58	+0.9
1,424,073	+		Psyr_1263	0.58	+0.4
1,424,288	-		Psyr_1263	0.62	-0.0
1,424,323	+		Psyr_1263	0.63	+1.0
1,424,323	+		Psyr_1263	0.63	-0.9
1,424,323	+		Psyr_1263	0.63	-0.2
1,424,324	-		Psyr_1263	0.63	+1.0
1,424,324	-		Psyr_1263	0.63	-0.3
1,424,324	-		Psyr_1263	0.63	-0.1
1,424,324	-		Psyr_1263	0.63	-0.6
1,424,324	-		Psyr_1263	0.63	+0.3
1,424,324	-		Psyr_1263	0.63	+0.1
1,424,324	-		Psyr_1263	0.63	+0.2
1,424,502	+		Psyr_1263	0.67	+0.3
1,424,502	+		Psyr_1263	0.67	+0.4
1,424,503	-		Psyr_1263	0.67	+0.4
1,424,503	-		Psyr_1263	0.67	+0.6
1,424,503	-		Psyr_1263	0.67	+0.0
1,424,556	+		Psyr_1263	0.68	-0.9
1,424,556	+		Psyr_1263	0.68	-0.7
1,424,556	+		Psyr_1263	0.68	-1.0
1,424,556	+		Psyr_1263	0.68	+0.3
1,424,556	+		Psyr_1263	0.68	-0.8
1,424,556	+		Psyr_1263	0.68	+0.8
1,424,556	+		Psyr_1263	0.68	-0.5
1,424,557	-		Psyr_1263	0.68	+0.4
1,424,557	-		Psyr_1263	0.68	+3.0
1,424,557	-		Psyr_1263	0.68	-0.9
1,424,557	-		Psyr_1263	0.68	+0.2
1,424,583	+		Psyr_1263	0.68	-0.0
1,424,583	+		Psyr_1263	0.68	+0.2
1,424,583	+		Psyr_1263	0.68	-0.5
1,424,583	+		Psyr_1263	0.68	+0.0
1,424,583	+		Psyr_1263	0.68	+0.1
1,424,584	-		Psyr_1263	0.68	+0.4
1,424,584	-		Psyr_1263	0.68	+3.8
1,424,739	+		Psyr_1263	0.72	-1.2
1,424,758	-		Psyr_1263	0.72	-0.3
1,424,784	+		Psyr_1263	0.73	+0.5
1,424,784	+		Psyr_1263	0.73	-0.1
1,424,785	-		Psyr_1263	0.73	+0.6
1,424,901	+		Psyr_1263	0.75	-0.3
1,424,902	-		Psyr_1263	0.75	-0.7
1,424,970	-		Psyr_1263	0.77	-0.9
1,425,043	-		Psyr_1263	0.78	-2.2
1,425,074	+		Psyr_1263	0.79	-0.6
1,425,198	-		Psyr_1263	0.82	+0.4
1,425,203	+		Psyr_1263	0.82	-0.7
1,425,203	+		Psyr_1263	0.82	-1.0
1,425,203	+		Psyr_1263	0.82	-1.3
1,425,203	+		Psyr_1263	0.82	-0.4
1,425,204	-		Psyr_1263	0.82	-0.5
1,425,204	-		Psyr_1263	0.82	+0.1
1,425,204	-		Psyr_1263	0.82	-1.6
1,425,204	-		Psyr_1263	0.82	-0.8
1,425,204	-		Psyr_1263	0.82	+0.6
1,425,204	-		Psyr_1263	0.82	+1.0
1,425,410	+		Psyr_1263	0.86	-1.0
1,425,411	-		Psyr_1263	0.86	+0.5
1,425,411	-		Psyr_1263	0.86	-0.2
1,425,411	-		Psyr_1263	0.86	-1.0
1,425,415	-		Psyr_1263	0.86	-0.2
1,425,438	+		Psyr_1263	0.87	-0.5
1,425,478	-		Psyr_1263	0.88	+1.0
1,425,478	-		Psyr_1263	0.88	-0.5
1,425,520	-		Psyr_1263	0.88	-1.5
1,425,521	+		Psyr_1263	0.88	+1.6
1,425,522	-		Psyr_1263	0.88	-0.3
1,425,522	-		Psyr_1263	0.88	-0.1
1,425,573	-		Psyr_1263	0.90	-1.8
1,425,641	+				+1.6
1,425,648	-				+0.7
1,425,688	-				-0.0
1,425,783	+				-0.4
1,425,783	+				-0.7
1,425,783	+				+0.7
1,425,784	-				-0.1
1,425,784	-				+0.3
1,425,784	-				+0.3
1,425,800	+				-0.2
1,425,800	+				-0.9
1,425,824	+				+1.7
1,425,827	-				-1.3
1,425,885	+				-0.0
1,425,886	-				+0.5
1,425,886	-				+0.4
1,425,886	-				+2.6
1,425,886	-				+1.0
1,425,965	+				+0.3
1,425,973	-				+0.6
1,425,973	-				+1.9
1,425,991	-				+0.3
1,425,994	+				-2.0
1,425,994	+				+2.4
1,425,994	+				+0.4
1,425,994	+				-0.3
1,425,995	-				+0.2
1,425,995	-				+1.2
1,425,995	-				-0.6
1,425,995	-				-0.5
1,426,094	+				+0.5
1,426,094	+				-1.8
1,426,094	+				-1.6
1,426,094	+				-0.5
1,426,095	-				+0.1
1,426,095	-				-0.2
1,426,100	-				-1.3
1,426,103	+				+1.3
1,426,103	+				+0.6
1,426,104	-				-0.3
1,426,105	+				+0.1
1,426,106	-				-0.5
1,426,106	-				-1.2
1,426,123	+				+0.8
1,426,162	-				-0.9
1,426,162	-				-1.5
1,426,162	-				-0.4
1,426,162	-				-0.4
1,426,162	-				+0.4
1,426,162	-				+0.8
1,426,162	-				-2.3
1,426,162	-				-1.5
1,426,203	+				+0.4
1,426,257	-				+1.2
1,426,260	-				-2.5
1,426,283	-				+0.7
1,426,343	+				+1.8
1,426,343	+				+0.5
1,426,348	+				+0.5
1,426,348	+				-0.9
1,426,349	-				+0.7
1,426,349	-				+0.2
1,426,352	+				-0.4
1,426,353	-				+0.0
1,426,366	+				+0.2
1,426,392	-				-1.6
1,426,727	+		Psyr_1264	0.14	+1.4
1,426,727	+		Psyr_1264	0.14	-0.5
1,426,727	+		Psyr_1264	0.14	+0.4
1,426,727	+		Psyr_1264	0.14	-0.3
1,426,728	-		Psyr_1264	0.14	-0.3
1,426,728	-		Psyr_1264	0.14	-0.0
1,426,728	-		Psyr_1264	0.14	+3.3
1,426,940	+		Psyr_1264	0.58	+1.7
1,426,985	+		Psyr_1264	0.67	+0.3
1,427,013	+		Psyr_1264	0.73	+1.3