Experiment: KB with Totarol 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0631 and Psyr_0632 overlap by 8 nucleotides Psyr_0632 and Psyr_0633 are separated by 275 nucleotides Psyr_0633 and Psyr_0634 are separated by 25 nucleotides
Psyr_0631: Psyr_0631 - Flavoprotein, at 721,896 to 722,525
_0631
Psyr_0632: Psyr_0632 - Protein of unknown function DUF1375, at 722,518 to 722,802
_0632
Psyr_0633: Psyr_0633 - conserved hypothetical protein, at 723,078 to 723,719
_0633
Psyr_0634: Psyr_0634 - MORN motif protein, at 723,745 to 725,472
_0634
Position (kb) 723
724 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 722.507 kb on + strand at 722.507 kb on + strand at 722.523 kb on + strand at 722.524 kb on - strand at 722.524 kb on - strand at 722.524 kb on - strand at 722.524 kb on - strand at 722.614 kb on + strand, within Psyr_0632 at 722.614 kb on + strand, within Psyr_0632 at 722.614 kb on + strand, within Psyr_0632 at 722.614 kb on + strand, within Psyr_0632 at 722.614 kb on + strand, within Psyr_0632 at 722.614 kb on + strand, within Psyr_0632 at 722.614 kb on + strand, within Psyr_0632 at 722.615 kb on - strand, within Psyr_0632 at 722.615 kb on - strand, within Psyr_0632 at 722.615 kb on - strand, within Psyr_0632 at 722.615 kb on - strand, within Psyr_0632 at 722.615 kb on - strand, within Psyr_0632 at 722.615 kb on - strand, within Psyr_0632 at 722.615 kb on - strand, within Psyr_0632 at 722.615 kb on - strand, within Psyr_0632 at 722.615 kb on - strand, within Psyr_0632 at 722.615 kb on - strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.635 kb on - strand, within Psyr_0632 at 722.635 kb on - strand, within Psyr_0632 at 722.635 kb on - strand, within Psyr_0632 at 722.635 kb on - strand, within Psyr_0632 at 722.635 kb on - strand, within Psyr_0632 at 722.635 kb on - strand, within Psyr_0632 at 722.635 kb on - strand, within Psyr_0632 at 722.635 kb on - strand, within Psyr_0632 at 722.635 kb on - strand, within Psyr_0632 at 722.635 kb on - strand, within Psyr_0632 at 722.635 kb on - strand, within Psyr_0632 at 722.635 kb on - strand, within Psyr_0632 at 722.638 kb on + strand, within Psyr_0632 at 722.638 kb on + strand, within Psyr_0632 at 722.638 kb on + strand, within Psyr_0632 at 722.638 kb on + strand, within Psyr_0632 at 722.638 kb on + strand, within Psyr_0632 at 722.638 kb on + strand, within Psyr_0632 at 722.638 kb on + strand, within Psyr_0632 at 722.638 kb on + strand, within Psyr_0632 at 722.638 kb on + strand, within Psyr_0632 at 722.638 kb on + strand, within Psyr_0632 at 722.638 kb on + strand, within Psyr_0632 at 722.638 kb on + strand, within Psyr_0632 at 722.638 kb on + strand, within Psyr_0632 at 722.639 kb on - strand, within Psyr_0632 at 722.639 kb on - strand, within Psyr_0632 at 722.639 kb on - strand, within Psyr_0632 at 722.639 kb on - strand, within Psyr_0632 at 722.639 kb on - strand, within Psyr_0632 at 722.639 kb on - strand, within Psyr_0632 at 722.639 kb on - strand, within Psyr_0632 at 722.639 kb on - strand, within Psyr_0632 at 722.639 kb on - strand, within Psyr_0632 at 722.639 kb on - strand, within Psyr_0632 at 722.695 kb on + strand, within Psyr_0632 at 722.801 kb on - strand at 722.838 kb on + strand at 722.838 kb on + strand at 722.839 kb on - strand at 722.839 kb on - strand at 722.839 kb on - strand at 722.840 kb on + strand at 722.841 kb on - strand at 722.841 kb on - strand at 722.841 kb on - strand at 722.841 kb on - strand at 722.841 kb on - strand at 722.841 kb on - strand at 722.841 kb on - strand at 722.842 kb on + strand at 722.842 kb on + strand at 722.842 kb on + strand at 722.842 kb on + strand at 722.842 kb on + strand at 722.842 kb on + strand at 722.843 kb on - strand at 722.843 kb on - strand at 722.843 kb on - strand at 722.843 kb on - strand at 722.843 kb on - strand at 722.843 kb on - strand at 722.843 kb on - strand at 722.843 kb on - strand at 722.843 kb on - strand at 722.843 kb on - strand at 723.079 kb on + strand at 723.079 kb on + strand at 723.079 kb on + strand at 723.079 kb on + strand at 723.079 kb on + strand at 723.079 kb on + strand at 723.080 kb on - strand at 723.080 kb on - strand at 723.080 kb on - strand at 723.080 kb on - strand at 723.080 kb on - strand at 723.080 kb on - strand at 723.080 kb on - strand at 723.080 kb on - strand at 723.080 kb on - strand at 723.080 kb on - strand at 723.190 kb on + strand, within Psyr_0633 at 723.216 kb on - strand, within Psyr_0633 at 723.346 kb on + strand, within Psyr_0633 at 723.347 kb on - strand, within Psyr_0633 at 723.347 kb on - strand, within Psyr_0633 at 723.347 kb on - strand, within Psyr_0633 at 723.347 kb on - strand, within Psyr_0633 at 723.715 kb on + strand at 723.715 kb on + strand at 723.715 kb on + strand at 723.715 kb on + strand at 723.715 kb on + strand at 723.715 kb on + strand at 723.715 kb on + strand at 723.716 kb on - strand at 723.716 kb on - strand at 723.716 kb on - strand at 723.716 kb on - strand at 723.716 kb on - strand at 723.716 kb on - strand at 723.716 kb on - strand at 723.716 kb on - strand at 723.716 kb on - strand at 723.719 kb on + strand at 723.719 kb on + strand at 723.719 kb on + strand at 723.719 kb on + strand at 723.719 kb on + strand at 723.719 kb on + strand at 723.720 kb on - strand at 723.720 kb on - strand at 723.720 kb on - strand at 723.720 kb on - strand at 723.720 kb on - strand at 723.720 kb on - strand at 723.720 kb on - strand at 723.720 kb on - strand at 723.734 kb on + strand at 723.740 kb on + strand at 723.740 kb on + strand at 723.741 kb on - strand at 723.741 kb on - strand at 723.741 kb on - strand at 723.859 kb on + strand at 723.859 kb on + strand at 723.911 kb on + strand at 723.911 kb on + strand at 723.911 kb on + strand at 723.911 kb on + strand at 723.911 kb on + strand at 723.911 kb on + strand at 723.911 kb on + strand at 723.911 kb on + strand at 723.912 kb on - strand at 723.912 kb on - strand at 723.912 kb on - strand at 723.912 kb on - strand at 723.912 kb on - strand at 723.973 kb on + strand, within Psyr_0634 at 723.973 kb on + strand, within Psyr_0634 at 723.973 kb on + strand, within Psyr_0634 at 723.973 kb on + strand, within Psyr_0634 at 723.974 kb on - strand, within Psyr_0634 at 723.974 kb on - strand, within Psyr_0634 at 723.974 kb on - strand, within Psyr_0634 at 723.974 kb on - strand, within Psyr_0634 at 723.974 kb on - strand, within Psyr_0634 at 723.974 kb on - strand, within Psyr_0634 at 723.990 kb on - strand, within Psyr_0634 at 723.990 kb on - strand, within Psyr_0634 at 724.098 kb on - strand, within Psyr_0634 at 724.241 kb on + strand, within Psyr_0634 at 724.241 kb on + strand, within Psyr_0634 at 724.241 kb on + strand, within Psyr_0634 at 724.241 kb on + strand, within Psyr_0634 at 724.242 kb on - strand, within Psyr_0634 at 724.242 kb on - strand, within Psyr_0634 at 724.242 kb on - strand, within Psyr_0634 at 724.242 kb on - strand, within Psyr_0634 at 724.406 kb on + strand, within Psyr_0634 at 724.406 kb on + strand, within Psyr_0634 at 724.406 kb on + strand, within Psyr_0634 at 724.406 kb on + strand, within Psyr_0634 at 724.407 kb on - strand, within Psyr_0634 at 724.407 kb on - strand, within Psyr_0634 at 724.407 kb on - strand, within Psyr_0634 at 724.463 kb on + strand, within Psyr_0634 at 724.464 kb on - strand, within Psyr_0634 at 724.655 kb on + strand, within Psyr_0634 at 724.655 kb on + strand, within Psyr_0634 at 724.656 kb on - strand, within Psyr_0634 at 724.656 kb on - strand, within Psyr_0634 at 724.656 kb on - strand, within Psyr_0634 at 724.683 kb on - strand, within Psyr_0634
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Totarol 10 mM remove 722,507 + -1.4 722,507 + -0.5 722,523 + +1.1 722,524 - -0.0 722,524 - +1.4 722,524 - +0.2 722,524 - -1.5 722,614 + Psyr_0632 0.34 +3.9 722,614 + Psyr_0632 0.34 -1.7 722,614 + Psyr_0632 0.34 -0.2 722,614 + Psyr_0632 0.34 -0.6 722,614 + Psyr_0632 0.34 -1.2 722,614 + Psyr_0632 0.34 +1.9 722,614 + Psyr_0632 0.34 -0.4 722,615 - Psyr_0632 0.34 -0.3 722,615 - Psyr_0632 0.34 -0.4 722,615 - Psyr_0632 0.34 -3.5 722,615 - Psyr_0632 0.34 +0.2 722,615 - Psyr_0632 0.34 +0.1 722,615 - Psyr_0632 0.34 +0.2 722,615 - Psyr_0632 0.34 -0.2 722,615 - Psyr_0632 0.34 +1.1 722,615 - Psyr_0632 0.34 +0.6 722,615 - Psyr_0632 0.34 +0.2 722,634 + Psyr_0632 0.41 -0.5 722,634 + Psyr_0632 0.41 +1.1 722,634 + Psyr_0632 0.41 -0.2 722,634 + Psyr_0632 0.41 -1.1 722,634 + Psyr_0632 0.41 -0.6 722,634 + Psyr_0632 0.41 -0.3 722,634 + Psyr_0632 0.41 +0.9 722,634 + Psyr_0632 0.41 -0.1 722,634 + Psyr_0632 0.41 +0.4 722,634 + Psyr_0632 0.41 +0.6 722,634 + Psyr_0632 0.41 -0.7 722,634 + Psyr_0632 0.41 -0.7 722,634 + Psyr_0632 0.41 -0.6 722,634 + Psyr_0632 0.41 -0.1 722,634 + Psyr_0632 0.41 +0.4 722,635 - Psyr_0632 0.41 -0.0 722,635 - Psyr_0632 0.41 +0.6 722,635 - Psyr_0632 0.41 +0.7 722,635 - Psyr_0632 0.41 -1.5 722,635 - Psyr_0632 0.41 +1.4 722,635 - Psyr_0632 0.41 +1.1 722,635 - Psyr_0632 0.41 +0.9 722,635 - Psyr_0632 0.41 -0.4 722,635 - Psyr_0632 0.41 -0.8 722,635 - Psyr_0632 0.41 -0.3 722,635 - Psyr_0632 0.41 -0.8 722,635 - Psyr_0632 0.41 -0.7 722,638 + Psyr_0632 0.42 +0.6 722,638 + Psyr_0632 0.42 -1.2 722,638 + Psyr_0632 0.42 +0.0 722,638 + Psyr_0632 0.42 -0.2 722,638 + Psyr_0632 0.42 -0.5 722,638 + Psyr_0632 0.42 -0.0 722,638 + Psyr_0632 0.42 -1.3 722,638 + Psyr_0632 0.42 -3.5 722,638 + Psyr_0632 0.42 +0.1 722,638 + Psyr_0632 0.42 +0.1 722,638 + Psyr_0632 0.42 +0.4 722,638 + Psyr_0632 0.42 +0.1 722,638 + Psyr_0632 0.42 -0.7 722,639 - Psyr_0632 0.42 -0.2 722,639 - Psyr_0632 0.42 +0.9 722,639 - Psyr_0632 0.42 +0.8 722,639 - Psyr_0632 0.42 -0.7 722,639 - Psyr_0632 0.42 -1.1 722,639 - Psyr_0632 0.42 +0.2 722,639 - Psyr_0632 0.42 +0.6 722,639 - Psyr_0632 0.42 -0.5 722,639 - Psyr_0632 0.42 -1.0 722,639 - Psyr_0632 0.42 +0.6 722,695 + Psyr_0632 0.62 +0.0 722,801 - +1.6 722,838 + +1.1 722,838 + +3.7 722,839 - -2.5 722,839 - +0.4 722,839 - -1.0 722,840 + +0.1 722,841 - +0.9 722,841 - +2.4 722,841 - -0.2 722,841 - +1.1 722,841 - -0.2 722,841 - +3.7 722,841 - +1.6 722,842 + -1.3 722,842 + -0.3 722,842 + -1.7 722,842 + +0.3 722,842 + -0.2 722,842 + -1.4 722,843 - -1.6 722,843 - +1.1 722,843 - +0.1 722,843 - -0.3 722,843 - -0.0 722,843 - +0.4 722,843 - +0.2 722,843 - +1.2 722,843 - -1.5 722,843 - +2.7 723,079 + +2.3 723,079 + -1.4 723,079 + -0.5 723,079 + -0.6 723,079 + -1.7 723,079 + +1.1 723,080 - -0.3 723,080 - +1.4 723,080 - +1.1 723,080 - +0.6 723,080 - -1.2 723,080 - +0.4 723,080 - +0.4 723,080 - -0.8 723,080 - -0.1 723,080 - +2.1 723,190 + Psyr_0633 0.17 -1.5 723,216 - Psyr_0633 0.21 -1.0 723,346 + Psyr_0633 0.42 -0.2 723,347 - Psyr_0633 0.42 +1.1 723,347 - Psyr_0633 0.42 -1.1 723,347 - Psyr_0633 0.42 +0.6 723,347 - Psyr_0633 0.42 -0.3 723,715 + +0.2 723,715 + +0.4 723,715 + +3.7 723,715 + -0.1 723,715 + +0.4 723,715 + +0.5 723,715 + -0.5 723,716 - -1.2 723,716 - +1.3 723,716 - +1.1 723,716 - +1.5 723,716 - -1.2 723,716 - -0.6 723,716 - +0.3 723,716 - -0.4 723,716 - +0.5 723,719 + +0.1 723,719 + +0.2 723,719 + -1.5 723,719 + -0.1 723,719 + -0.5 723,719 + +1.1 723,720 - +0.1 723,720 - -0.4 723,720 - -0.9 723,720 - +0.4 723,720 - +2.3 723,720 - -0.0 723,720 - -0.2 723,720 - -0.0 723,734 + -0.1 723,740 + +0.6 723,740 + -0.1 723,741 - +0.3 723,741 - -2.3 723,741 - -0.6 723,859 + -1.1 723,859 + -0.5 723,911 + +0.2 723,911 + -0.2 723,911 + -1.2 723,911 + -1.5 723,911 + +1.3 723,911 + +0.5 723,911 + -0.2 723,911 + -0.3 723,912 - -0.5 723,912 - -1.5 723,912 - -0.2 723,912 - +0.9 723,912 - +1.8 723,973 + Psyr_0634 0.13 -1.2 723,973 + Psyr_0634 0.13 -0.3 723,973 + Psyr_0634 0.13 +0.4 723,973 + Psyr_0634 0.13 -1.0 723,974 - Psyr_0634 0.13 +0.2 723,974 - Psyr_0634 0.13 -1.5 723,974 - Psyr_0634 0.13 +0.1 723,974 - Psyr_0634 0.13 -2.2 723,974 - Psyr_0634 0.13 -0.5 723,974 - Psyr_0634 0.13 +1.4 723,990 - Psyr_0634 0.14 +1.4 723,990 - Psyr_0634 0.14 +3.3 724,098 - Psyr_0634 0.20 -0.4 724,241 + Psyr_0634 0.29 +1.1 724,241 + Psyr_0634 0.29 -0.7 724,241 + Psyr_0634 0.29 -0.8 724,241 + Psyr_0634 0.29 +0.9 724,242 - Psyr_0634 0.29 +0.1 724,242 - Psyr_0634 0.29 -0.5 724,242 - Psyr_0634 0.29 -0.2 724,242 - Psyr_0634 0.29 -0.3 724,406 + Psyr_0634 0.38 -0.3 724,406 + Psyr_0634 0.38 -0.5 724,406 + Psyr_0634 0.38 +0.7 724,406 + Psyr_0634 0.38 +0.3 724,407 - Psyr_0634 0.38 +0.1 724,407 - Psyr_0634 0.38 -0.9 724,407 - Psyr_0634 0.38 -0.2 724,463 + Psyr_0634 0.42 +1.9 724,464 - Psyr_0634 0.42 +0.3 724,655 + Psyr_0634 0.53 +2.7 724,655 + Psyr_0634 0.53 +1.0 724,656 - Psyr_0634 0.53 +2.1 724,656 - Psyr_0634 0.53 -0.5 724,656 - Psyr_0634 0.53 +1.3 724,683 - Psyr_0634 0.54 +0.5
Or see this region's nucleotide sequence