Experiment: P5ss-5 phage 10-1 dilution SM calcl2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_26655 and AO356_26660 are separated by 2 nucleotides AO356_26660 and AO356_26665 overlap by 4 nucleotides AO356_26665 and AO356_26670 are separated by 163 nucleotides
AO356_26655: AO356_26655 - (2Fe-2S)-binding protein, at 6,067,645 to 6,068,145
_26655
AO356_26660: AO356_26660 - carbon monoxide dehydrogenase, at 6,068,148 to 6,068,954
_26660
AO356_26665: AO356_26665 - carbon monoxide dehydrogenase, at 6,068,951 to 6,071,950
_26665
AO356_26670: AO356_26670 - histidine kinase, at 6,072,114 to 6,074,324
_26670
Position (kb)
6068
6069
6070
6071
6072 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6068.413 kb on + strand, within AO356_26660 at 6068.770 kb on + strand, within AO356_26660 at 6068.771 kb on - strand, within AO356_26660 at 6068.771 kb on - strand, within AO356_26660 at 6068.884 kb on + strand at 6069.141 kb on + strand at 6069.142 kb on - strand at 6069.148 kb on - strand at 6069.644 kb on - strand, within AO356_26665 at 6070.171 kb on + strand, within AO356_26665 at 6070.172 kb on - strand, within AO356_26665 at 6070.284 kb on + strand, within AO356_26665 at 6070.539 kb on + strand, within AO356_26665 at 6070.539 kb on + strand, within AO356_26665 at 6070.539 kb on + strand, within AO356_26665 at 6070.540 kb on - strand, within AO356_26665 at 6070.540 kb on - strand, within AO356_26665 at 6070.821 kb on + strand, within AO356_26665 at 6071.002 kb on - strand, within AO356_26665 at 6071.033 kb on + strand, within AO356_26665 at 6071.033 kb on + strand, within AO356_26665 at 6071.304 kb on + strand, within AO356_26665 at 6071.344 kb on - strand, within AO356_26665 at 6071.544 kb on + strand, within AO356_26665 at 6071.625 kb on + strand, within AO356_26665 at 6071.630 kb on + strand, within AO356_26665 at 6071.631 kb on - strand, within AO356_26665 at 6071.816 kb on + strand at 6072.181 kb on + strand at 6072.182 kb on - strand at 6072.290 kb on + strand at 6072.388 kb on + strand, within AO356_26670 at 6072.486 kb on - strand, within AO356_26670 at 6072.561 kb on + strand, within AO356_26670 at 6072.561 kb on + strand, within AO356_26670 at 6072.561 kb on + strand, within AO356_26670 at 6072.561 kb on + strand, within AO356_26670 at 6072.562 kb on - strand, within AO356_26670 at 6072.565 kb on + strand, within AO356_26670 at 6072.566 kb on - strand, within AO356_26670 at 6072.645 kb on + strand, within AO356_26670 at 6072.746 kb on + strand, within AO356_26670 at 6072.817 kb on - strand, within AO356_26670 at 6072.908 kb on - strand, within AO356_26670
Per-strain Table
Position Strand Gene LocusTag Fraction P5ss-5 phage 10-1 dilution SM calcl2 remove 6,068,413 + AO356_26660 0.33 -0.4 6,068,770 + AO356_26660 0.77 -0.2 6,068,771 - AO356_26660 0.77 +0.6 6,068,771 - AO356_26660 0.77 +1.2 6,068,884 + -0.5 6,069,141 + +0.6 6,069,142 - -2.1 6,069,148 - -0.0 6,069,644 - AO356_26665 0.23 -2.2 6,070,171 + AO356_26665 0.41 +1.1 6,070,172 - AO356_26665 0.41 -1.5 6,070,284 + AO356_26665 0.44 +1.5 6,070,539 + AO356_26665 0.53 +0.5 6,070,539 + AO356_26665 0.53 -1.0 6,070,539 + AO356_26665 0.53 +0.8 6,070,540 - AO356_26665 0.53 +0.3 6,070,540 - AO356_26665 0.53 -1.6 6,070,821 + AO356_26665 0.62 +0.9 6,071,002 - AO356_26665 0.68 +0.7 6,071,033 + AO356_26665 0.69 -0.2 6,071,033 + AO356_26665 0.69 -1.4 6,071,304 + AO356_26665 0.78 +1.1 6,071,344 - AO356_26665 0.80 +0.1 6,071,544 + AO356_26665 0.86 -1.0 6,071,625 + AO356_26665 0.89 +0.7 6,071,630 + AO356_26665 0.89 -0.2 6,071,631 - AO356_26665 0.89 -1.2 6,071,816 + +0.1 6,072,181 + +0.2 6,072,182 - -1.8 6,072,290 + -0.5 6,072,388 + AO356_26670 0.12 +1.7 6,072,486 - AO356_26670 0.17 +1.0 6,072,561 + AO356_26670 0.20 -1.7 6,072,561 + AO356_26670 0.20 +1.3 6,072,561 + AO356_26670 0.20 -0.7 6,072,561 + AO356_26670 0.20 +2.3 6,072,562 - AO356_26670 0.20 -0.6 6,072,565 + AO356_26670 0.20 +0.4 6,072,566 - AO356_26670 0.20 +0.1 6,072,645 + AO356_26670 0.24 -0.9 6,072,746 + AO356_26670 0.29 -1.4 6,072,817 - AO356_26670 0.32 -0.7 6,072,908 - AO356_26670 0.36 -0.9
Or see this region's nucleotide sequence