Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_20415

Experiment: P5ss-5 phage 10-1 dilution SM calcl2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_20410 and AO356_20415 are separated by 134 nucleotidesAO356_20415 and AO356_20420 are separated by 309 nucleotides AO356_20410: AO356_20410 - magnesium transporter, at 4,558,605 to 4,559,576 _20410 AO356_20415: AO356_20415 - acyl-phosphate glycerol 3-phosphate acyltransferase, at 4,559,711 to 4,560,433 _20415 AO356_20420: AO356_20420 - enoyl-CoA hydratase, at 4,560,743 to 4,561,432 _20420 Position (kb) 4559 4560 4561Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 4558.729 kb on + strand, within AO356_20410at 4558.729 kb on + strand, within AO356_20410at 4558.729 kb on + strand, within AO356_20410at 4558.729 kb on + strand, within AO356_20410at 4558.730 kb on - strand, within AO356_20410at 4558.730 kb on - strand, within AO356_20410at 4558.730 kb on - strand, within AO356_20410at 4558.899 kb on + strand, within AO356_20410at 4558.899 kb on + strand, within AO356_20410at 4558.900 kb on - strand, within AO356_20410at 4558.900 kb on - strand, within AO356_20410at 4558.900 kb on - strand, within AO356_20410at 4558.900 kb on - strand, within AO356_20410at 4558.900 kb on - strand, within AO356_20410at 4558.900 kb on - strand, within AO356_20410at 4559.007 kb on + strand, within AO356_20410at 4559.007 kb on + strand, within AO356_20410at 4559.007 kb on + strand, within AO356_20410at 4559.007 kb on + strand, within AO356_20410at 4559.007 kb on + strand, within AO356_20410at 4559.008 kb on - strand, within AO356_20410at 4559.152 kb on + strand, within AO356_20410at 4559.153 kb on - strand, within AO356_20410at 4559.153 kb on - strand, within AO356_20410at 4559.186 kb on + strand, within AO356_20410at 4559.186 kb on + strand, within AO356_20410at 4559.187 kb on - strand, within AO356_20410at 4559.187 kb on - strand, within AO356_20410at 4559.221 kb on + strand, within AO356_20410at 4559.221 kb on + strand, within AO356_20410at 4559.222 kb on - strand, within AO356_20410at 4559.257 kb on + strand, within AO356_20410at 4559.258 kb on - strand, within AO356_20410at 4559.258 kb on - strand, within AO356_20410at 4559.258 kb on - strand, within AO356_20410at 4559.258 kb on - strand, within AO356_20410at 4559.277 kb on - strand, within AO356_20410at 4559.313 kb on + strand, within AO356_20410at 4559.313 kb on + strand, within AO356_20410at 4559.323 kb on + strand, within AO356_20410at 4559.323 kb on + strand, within AO356_20410at 4559.323 kb on + strand, within AO356_20410at 4559.324 kb on - strand, within AO356_20410at 4559.324 kb on - strand, within AO356_20410at 4559.324 kb on - strand, within AO356_20410at 4559.570 kb on + strandat 4559.577 kb on - strandat 4559.594 kb on + strandat 4559.594 kb on + strandat 4559.656 kb on + strandat 4559.657 kb on - strandat 4559.657 kb on - strandat 4559.723 kb on + strandat 4559.723 kb on + strandat 4559.837 kb on + strand, within AO356_20415at 4559.838 kb on - strand, within AO356_20415at 4559.838 kb on - strand, within AO356_20415at 4559.838 kb on - strand, within AO356_20415at 4559.838 kb on - strand, within AO356_20415at 4559.838 kb on - strand, within AO356_20415at 4559.886 kb on + strand, within AO356_20415at 4559.886 kb on + strand, within AO356_20415at 4559.886 kb on + strand, within AO356_20415at 4559.887 kb on - strand, within AO356_20415at 4559.980 kb on + strand, within AO356_20415at 4560.031 kb on + strand, within AO356_20415at 4560.031 kb on + strand, within AO356_20415at 4560.031 kb on + strand, within AO356_20415at 4560.031 kb on + strand, within AO356_20415at 4560.031 kb on + strand, within AO356_20415at 4560.031 kb on + strand, within AO356_20415at 4560.032 kb on - strand, within AO356_20415at 4560.032 kb on - strand, within AO356_20415at 4560.032 kb on - strand, within AO356_20415at 4560.032 kb on - strand, within AO356_20415at 4560.201 kb on + strandat 4560.201 kb on + strand, within AO356_20415at 4560.201 kb on + strand, within AO356_20415at 4560.202 kb on - strand, within AO356_20415at 4560.202 kb on - strand, within AO356_20415at 4560.202 kb on - strand, within AO356_20415at 4560.244 kb on + strand, within AO356_20415at 4560.245 kb on - strand, within AO356_20415at 4560.245 kb on - strand, within AO356_20415at 4560.252 kb on - strand, within AO356_20415at 4560.309 kb on + strand, within AO356_20415at 4560.310 kb on - strand, within AO356_20415at 4560.323 kb on + strand, within AO356_20415at 4560.323 kb on + strand, within AO356_20415at 4560.415 kb on + strandat 4560.415 kb on + strandat 4560.415 kb on + strandat 4560.415 kb on + strandat 4560.416 kb on - strandat 4560.416 kb on - strandat 4560.416 kb on - strandat 4560.422 kb on + strandat 4560.422 kb on + strandat 4560.423 kb on - strandat 4560.423 kb on - strandat 4560.435 kb on + strandat 4560.436 kb on - strandat 4560.436 kb on - strandat 4560.436 kb on - strandat 4560.436 kb on - strandat 4560.469 kb on + strandat 4560.469 kb on + strandat 4560.469 kb on + strandat 4560.470 kb on - strandat 4560.503 kb on + strandat 4560.503 kb on + strandat 4560.504 kb on - strandat 4560.504 kb on - strandat 4560.517 kb on - strandat 4560.527 kb on + strandat 4560.527 kb on + strandat 4560.528 kb on - strandat 4560.528 kb on - strandat 4560.565 kb on - strandat 4560.614 kb on + strandat 4560.614 kb on + strandat 4560.615 kb on - strandat 4560.615 kb on - strandat 4560.642 kb on - strandat 4560.676 kb on + strandat 4560.735 kb on + strandat 4560.751 kb on + strandat 4560.752 kb on - strandat 4560.752 kb on - strandat 4560.752 kb on - strandat 4561.413 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction P5ss-5 phage 10-1 dilution SM calcl2
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4,558,729 + AO356_20410 0.13 +0.0
4,558,729 + AO356_20410 0.13 -0.2
4,558,729 + AO356_20410 0.13 +0.2
4,558,729 + AO356_20410 0.13 +1.7
4,558,730 - AO356_20410 0.13 +1.5
4,558,730 - AO356_20410 0.13 -0.4
4,558,730 - AO356_20410 0.13 -0.3
4,558,899 + AO356_20410 0.30 +0.6
4,558,899 + AO356_20410 0.30 -0.5
4,558,900 - AO356_20410 0.30 -0.0
4,558,900 - AO356_20410 0.30 -0.8
4,558,900 - AO356_20410 0.30 +0.6
4,558,900 - AO356_20410 0.30 -1.2
4,558,900 - AO356_20410 0.30 -0.4
4,558,900 - AO356_20410 0.30 -0.8
4,559,007 + AO356_20410 0.41 -0.1
4,559,007 + AO356_20410 0.41 -1.7
4,559,007 + AO356_20410 0.41 +0.3
4,559,007 + AO356_20410 0.41 +0.6
4,559,007 + AO356_20410 0.41 +1.2
4,559,008 - AO356_20410 0.41 +0.8
4,559,152 + AO356_20410 0.56 +0.5
4,559,153 - AO356_20410 0.56 -2.0
4,559,153 - AO356_20410 0.56 +0.7
4,559,186 + AO356_20410 0.60 -1.6
4,559,186 + AO356_20410 0.60 -0.2
4,559,187 - AO356_20410 0.60 -1.7
4,559,187 - AO356_20410 0.60 +0.7
4,559,221 + AO356_20410 0.63 +1.1
4,559,221 + AO356_20410 0.63 +0.5
4,559,222 - AO356_20410 0.63 -2.5
4,559,257 + AO356_20410 0.67 +0.5
4,559,258 - AO356_20410 0.67 +1.7
4,559,258 - AO356_20410 0.67 -2.7
4,559,258 - AO356_20410 0.67 -1.8
4,559,258 - AO356_20410 0.67 -0.1
4,559,277 - AO356_20410 0.69 -0.6
4,559,313 + AO356_20410 0.73 -2.2
4,559,313 + AO356_20410 0.73 -0.5
4,559,323 + AO356_20410 0.74 +0.2
4,559,323 + AO356_20410 0.74 -0.0
4,559,323 + AO356_20410 0.74 +0.5
4,559,324 - AO356_20410 0.74 -0.2
4,559,324 - AO356_20410 0.74 -0.5
4,559,324 - AO356_20410 0.74 +0.2
4,559,570 + +1.0
4,559,577 - -0.4
4,559,594 + +0.1
4,559,594 + -1.3
4,559,656 + -1.4
4,559,657 - +1.2
4,559,657 - +0.6
4,559,723 + +3.1
4,559,723 + -1.0
4,559,837 + AO356_20415 0.17 -1.1
4,559,838 - AO356_20415 0.18 -0.4
4,559,838 - AO356_20415 0.18 +0.9
4,559,838 - AO356_20415 0.18 -0.6
4,559,838 - AO356_20415 0.18 +0.3
4,559,838 - AO356_20415 0.18 -0.2
4,559,886 + AO356_20415 0.24 +0.4
4,559,886 + AO356_20415 0.24 +0.0
4,559,886 + AO356_20415 0.24 +0.5
4,559,887 - AO356_20415 0.24 -2.1
4,559,980 + AO356_20415 0.37 +1.2
4,560,031 + AO356_20415 0.44 -0.5
4,560,031 + AO356_20415 0.44 -2.5
4,560,031 + AO356_20415 0.44 +0.3
4,560,031 + AO356_20415 0.44 -0.5
4,560,031 + AO356_20415 0.44 -2.6
4,560,031 + AO356_20415 0.44 -0.9
4,560,032 - AO356_20415 0.44 -1.1
4,560,032 - AO356_20415 0.44 +1.6
4,560,032 - AO356_20415 0.44 +1.3
4,560,032 - AO356_20415 0.44 +0.2
4,560,201 + +1.4
4,560,201 + AO356_20415 0.68 -0.6
4,560,201 + AO356_20415 0.68 -1.2
4,560,202 - AO356_20415 0.68 +0.9
4,560,202 - AO356_20415 0.68 -0.3
4,560,202 - AO356_20415 0.68 -2.2
4,560,244 + AO356_20415 0.74 +0.8
4,560,245 - AO356_20415 0.74 -0.9
4,560,245 - AO356_20415 0.74 -1.0
4,560,252 - AO356_20415 0.75 +0.7
4,560,309 + AO356_20415 0.83 +0.8
4,560,310 - AO356_20415 0.83 -1.9
4,560,323 + AO356_20415 0.85 -1.2
4,560,323 + AO356_20415 0.85 -0.5
4,560,415 + -0.5
4,560,415 + -0.0
4,560,415 + +1.2
4,560,415 + -0.3
4,560,416 - +0.0
4,560,416 - -0.9
4,560,416 - -0.9
4,560,422 + -0.9
4,560,422 + +1.4
4,560,423 - -0.7
4,560,423 - -0.8
4,560,435 + +0.7
4,560,436 - -3.1
4,560,436 - -1.6
4,560,436 - +0.5
4,560,436 - +0.2
4,560,469 + -2.4
4,560,469 + -1.4
4,560,469 + -0.6
4,560,470 - +0.6
4,560,503 + +1.0
4,560,503 + -0.7
4,560,504 - -0.2
4,560,504 - +0.2
4,560,517 - -0.1
4,560,527 + +0.5
4,560,527 + +0.2
4,560,528 - -1.4
4,560,528 - -0.4
4,560,565 - -1.0
4,560,614 + -3.1
4,560,614 + -1.0
4,560,615 - -0.1
4,560,615 - +1.1
4,560,642 - +1.5
4,560,676 + +0.8
4,560,735 + +0.2
4,560,751 + -1.0
4,560,752 - -0.7
4,560,752 - -0.2
4,560,752 - -0.4
4,561,413 + +0.5

Or see this region's nucleotide sequence