Experiment: P5ss-5 phage 10-1 dilution SM calcl2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_17560 and AO356_17565 are separated by 40 nucleotides AO356_17565 and AO356_17570 are separated by 146 nucleotides
AO356_17560: AO356_17560 - hypothetical protein, at 3,960,120 to 3,960,626
_17560
AO356_17565: AO356_17565 - ADP-ribose pyrophosphatase, at 3,960,667 to 3,961,218
_17565
AO356_17570: AO356_17570 - DNA mismatch repair protein MutT, at 3,961,365 to 3,961,964
_17570
Position (kb)
3960
3961 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3959.145 kb on - strand at 3959.145 kb on - strand at 3959.147 kb on + strand at 3959.209 kb on + strand at 3959.209 kb on + strand at 3959.210 kb on - strand at 3959.210 kb on - strand at 3959.210 kb on - strand at 3959.210 kb on - strand at 3959.220 kb on - strand at 3959.220 kb on - strand at 3959.220 kb on - strand at 3959.220 kb on - strand at 3959.220 kb on - strand at 3959.223 kb on + strand at 3959.223 kb on + strand at 3959.224 kb on - strand at 3959.224 kb on - strand at 3959.224 kb on - strand at 3959.253 kb on - strand at 3959.286 kb on + strand at 3959.287 kb on - strand at 3959.287 kb on - strand at 3959.555 kb on + strand at 3959.572 kb on + strand at 3960.221 kb on + strand, within AO356_17560 at 3960.221 kb on + strand, within AO356_17560 at 3960.355 kb on + strand, within AO356_17560 at 3960.355 kb on + strand, within AO356_17560 at 3960.356 kb on - strand, within AO356_17560 at 3960.469 kb on + strand, within AO356_17560 at 3960.469 kb on + strand, within AO356_17560 at 3960.556 kb on + strand, within AO356_17560 at 3960.556 kb on + strand, within AO356_17560 at 3960.556 kb on + strand, within AO356_17560 at 3960.556 kb on + strand, within AO356_17560 at 3960.556 kb on + strand, within AO356_17560 at 3960.556 kb on + strand, within AO356_17560 at 3960.557 kb on - strand, within AO356_17560 at 3960.557 kb on - strand, within AO356_17560 at 3960.658 kb on + strand at 3960.658 kb on + strand at 3960.658 kb on + strand at 3960.659 kb on - strand at 3960.719 kb on + strand at 3960.719 kb on + strand at 3960.743 kb on + strand, within AO356_17565 at 3960.743 kb on + strand, within AO356_17565 at 3960.743 kb on + strand, within AO356_17565 at 3960.744 kb on - strand, within AO356_17565 at 3960.744 kb on - strand, within AO356_17565 at 3960.749 kb on + strand, within AO356_17565 at 3960.749 kb on + strand, within AO356_17565 at 3960.749 kb on + strand, within AO356_17565 at 3960.749 kb on + strand, within AO356_17565 at 3960.750 kb on - strand, within AO356_17565 at 3960.750 kb on - strand, within AO356_17565 at 3960.880 kb on + strand, within AO356_17565 at 3960.880 kb on + strand, within AO356_17565 at 3960.880 kb on + strand, within AO356_17565 at 3960.880 kb on + strand, within AO356_17565 at 3960.880 kb on + strand, within AO356_17565 at 3960.880 kb on + strand, within AO356_17565 at 3960.880 kb on + strand, within AO356_17565 at 3960.880 kb on + strand, within AO356_17565 at 3960.880 kb on + strand, within AO356_17565 at 3960.880 kb on + strand, within AO356_17565 at 3960.881 kb on - strand, within AO356_17565 at 3960.881 kb on - strand, within AO356_17565 at 3960.881 kb on - strand, within AO356_17565 at 3960.881 kb on - strand, within AO356_17565 at 3960.881 kb on - strand, within AO356_17565 at 3960.881 kb on - strand, within AO356_17565 at 3960.881 kb on - strand, within AO356_17565 at 3960.881 kb on - strand, within AO356_17565 at 3960.881 kb on - strand, within AO356_17565 at 3960.886 kb on + strand, within AO356_17565 at 3960.886 kb on + strand, within AO356_17565 at 3960.887 kb on - strand, within AO356_17565 at 3960.887 kb on - strand, within AO356_17565 at 3960.887 kb on - strand, within AO356_17565 at 3960.887 kb on - strand, within AO356_17565 at 3960.887 kb on - strand, within AO356_17565 at 3960.887 kb on - strand, within AO356_17565 at 3960.887 kb on - strand, within AO356_17565 at 3960.887 kb on - strand, within AO356_17565 at 3960.897 kb on + strand, within AO356_17565 at 3960.898 kb on - strand, within AO356_17565 at 3960.918 kb on + strand, within AO356_17565 at 3960.918 kb on + strand, within AO356_17565 at 3960.919 kb on - strand, within AO356_17565 at 3960.919 kb on - strand, within AO356_17565 at 3960.919 kb on - strand, within AO356_17565 at 3960.919 kb on - strand, within AO356_17565 at 3960.919 kb on - strand, within AO356_17565 at 3960.920 kb on + strand, within AO356_17565 at 3960.920 kb on + strand, within AO356_17565 at 3960.920 kb on + strand, within AO356_17565 at 3960.920 kb on + strand, within AO356_17565 at 3960.920 kb on + strand, within AO356_17565 at 3960.920 kb on + strand, within AO356_17565 at 3960.920 kb on + strand, within AO356_17565 at 3960.920 kb on + strand, within AO356_17565 at 3960.920 kb on + strand, within AO356_17565 at 3960.920 kb on + strand, within AO356_17565 at 3960.920 kb on + strand, within AO356_17565 at 3960.920 kb on + strand, within AO356_17565 at 3960.920 kb on + strand, within AO356_17565 at 3960.920 kb on + strand, within AO356_17565 at 3960.920 kb on + strand, within AO356_17565 at 3960.920 kb on + strand, within AO356_17565 at 3960.920 kb on + strand, within AO356_17565 at 3960.921 kb on - strand, within AO356_17565 at 3960.921 kb on - strand, within AO356_17565 at 3960.921 kb on - strand, within AO356_17565 at 3960.921 kb on - strand, within AO356_17565 at 3960.921 kb on - strand, within AO356_17565 at 3960.921 kb on - strand, within AO356_17565 at 3960.921 kb on - strand, within AO356_17565 at 3961.244 kb on - strand at 3961.343 kb on - strand at 3961.349 kb on + strand at 3961.349 kb on + strand at 3961.350 kb on - strand at 3961.350 kb on - strand at 3961.378 kb on + strand at 3961.378 kb on + strand at 3961.379 kb on - strand at 3961.379 kb on - strand at 3961.390 kb on + strand at 3961.400 kb on + strand at 3961.401 kb on - strand at 3961.401 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction P5ss-5 phage 10-1 dilution SM calcl2 remove 3,959,145 - +1.5 3,959,145 - -0.6 3,959,147 + -0.0 3,959,209 + +1.1 3,959,209 + -1.2 3,959,210 - +0.0 3,959,210 - +0.1 3,959,210 - +0.8 3,959,210 - -2.0 3,959,220 - +0.4 3,959,220 - +1.8 3,959,220 - -0.5 3,959,220 - -0.3 3,959,220 - +0.4 3,959,223 + +1.1 3,959,223 + +1.4 3,959,224 - +2.4 3,959,224 - -1.1 3,959,224 - +0.1 3,959,253 - -0.3 3,959,286 + -0.4 3,959,287 - +3.6 3,959,287 - +0.5 3,959,555 + -0.8 3,959,572 + -0.8 3,960,221 + AO356_17560 0.20 +0.5 3,960,221 + AO356_17560 0.20 +2.6 3,960,355 + AO356_17560 0.46 +1.8 3,960,355 + AO356_17560 0.46 +1.1 3,960,356 - AO356_17560 0.47 -1.6 3,960,469 + AO356_17560 0.69 +0.2 3,960,469 + AO356_17560 0.69 +1.6 3,960,556 + AO356_17560 0.86 -0.2 3,960,556 + AO356_17560 0.86 +2.0 3,960,556 + AO356_17560 0.86 -1.3 3,960,556 + AO356_17560 0.86 -2.4 3,960,556 + AO356_17560 0.86 +0.2 3,960,556 + AO356_17560 0.86 -0.1 3,960,557 - AO356_17560 0.86 -0.1 3,960,557 - AO356_17560 0.86 +1.8 3,960,658 + -1.6 3,960,658 + -0.6 3,960,658 + -0.2 3,960,659 - +1.5 3,960,719 + -0.2 3,960,719 + +0.4 3,960,743 + AO356_17565 0.14 -0.8 3,960,743 + AO356_17565 0.14 +0.4 3,960,743 + AO356_17565 0.14 +0.8 3,960,744 - AO356_17565 0.14 +1.2 3,960,744 - AO356_17565 0.14 -0.7 3,960,749 + AO356_17565 0.15 +0.5 3,960,749 + AO356_17565 0.15 -0.9 3,960,749 + AO356_17565 0.15 +0.8 3,960,749 + AO356_17565 0.15 +1.6 3,960,750 - AO356_17565 0.15 +0.4 3,960,750 - AO356_17565 0.15 +0.8 3,960,880 + AO356_17565 0.39 -0.1 3,960,880 + AO356_17565 0.39 -0.3 3,960,880 + AO356_17565 0.39 +0.8 3,960,880 + AO356_17565 0.39 +1.0 3,960,880 + AO356_17565 0.39 -1.2 3,960,880 + AO356_17565 0.39 +1.2 3,960,880 + AO356_17565 0.39 +0.4 3,960,880 + AO356_17565 0.39 -0.2 3,960,880 + AO356_17565 0.39 +1.4 3,960,880 + AO356_17565 0.39 -2.3 3,960,881 - AO356_17565 0.39 -0.7 3,960,881 - AO356_17565 0.39 +0.6 3,960,881 - AO356_17565 0.39 +0.1 3,960,881 - AO356_17565 0.39 -1.6 3,960,881 - AO356_17565 0.39 +0.5 3,960,881 - AO356_17565 0.39 -0.2 3,960,881 - AO356_17565 0.39 +1.9 3,960,881 - AO356_17565 0.39 +0.1 3,960,881 - AO356_17565 0.39 +0.3 3,960,886 + AO356_17565 0.40 +2.6 3,960,886 + AO356_17565 0.40 +1.4 3,960,887 - AO356_17565 0.40 +0.0 3,960,887 - AO356_17565 0.40 +0.4 3,960,887 - AO356_17565 0.40 +0.8 3,960,887 - AO356_17565 0.40 +0.1 3,960,887 - AO356_17565 0.40 -0.7 3,960,887 - AO356_17565 0.40 -0.1 3,960,887 - AO356_17565 0.40 -1.4 3,960,887 - AO356_17565 0.40 -1.8 3,960,897 + AO356_17565 0.42 -0.8 3,960,898 - AO356_17565 0.42 +1.3 3,960,918 + AO356_17565 0.45 -0.5 3,960,918 + AO356_17565 0.45 -1.0 3,960,919 - AO356_17565 0.46 +1.0 3,960,919 - AO356_17565 0.46 +0.6 3,960,919 - AO356_17565 0.46 -0.4 3,960,919 - AO356_17565 0.46 -1.3 3,960,919 - AO356_17565 0.46 -0.5 3,960,920 + AO356_17565 0.46 -2.0 3,960,920 + AO356_17565 0.46 +1.3 3,960,920 + AO356_17565 0.46 +0.2 3,960,920 + AO356_17565 0.46 -0.1 3,960,920 + AO356_17565 0.46 +0.5 3,960,920 + AO356_17565 0.46 +0.2 3,960,920 + AO356_17565 0.46 +0.0 3,960,920 + AO356_17565 0.46 -1.8 3,960,920 + AO356_17565 0.46 +1.7 3,960,920 + AO356_17565 0.46 +0.7 3,960,920 + AO356_17565 0.46 +0.8 3,960,920 + AO356_17565 0.46 -0.5 3,960,920 + AO356_17565 0.46 +0.9 3,960,920 + AO356_17565 0.46 -0.1 3,960,920 + AO356_17565 0.46 +0.0 3,960,920 + AO356_17565 0.46 +1.1 3,960,920 + AO356_17565 0.46 +0.5 3,960,921 - AO356_17565 0.46 -2.0 3,960,921 - AO356_17565 0.46 -0.2 3,960,921 - AO356_17565 0.46 -3.3 3,960,921 - AO356_17565 0.46 -0.7 3,960,921 - AO356_17565 0.46 -1.1 3,960,921 - AO356_17565 0.46 +0.2 3,960,921 - AO356_17565 0.46 -1.0 3,961,244 - +0.3 3,961,343 - +0.9 3,961,349 + +0.7 3,961,349 + -1.2 3,961,350 - -1.9 3,961,350 - +1.1 3,961,378 + -2.0 3,961,378 + -0.2 3,961,379 - +0.6 3,961,379 - +1.2 3,961,390 + -1.4 3,961,400 + +0.2 3,961,401 - +0.5 3,961,401 - -2.6
Or see this region's nucleotide sequence