Experiment: P5ss-5 phage 10-1 dilution SM calcl2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_15355 and AO356_15360 are separated by 72 nucleotides AO356_15360 and AO356_15365 are separated by 227 nucleotides
AO356_15355: AO356_15355 - murein transglycosylase, at 3,477,427 to 3,478,749
_15355
AO356_15360: AO356_15360 - lipoyl synthase, at 3,478,822 to 3,478,986
_15360
AO356_15365: AO356_15365 - DNA polymerase III subunit delta, at 3,479,214 to 3,480,251
_15365
Position (kb)
3478
3479 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3477.830 kb on + strand, within AO356_15355 at 3477.830 kb on + strand, within AO356_15355 at 3477.896 kb on + strand, within AO356_15355 at 3477.896 kb on + strand, within AO356_15355 at 3477.897 kb on - strand, within AO356_15355 at 3477.897 kb on - strand, within AO356_15355 at 3477.897 kb on - strand, within AO356_15355 at 3478.053 kb on + strand, within AO356_15355 at 3478.053 kb on + strand, within AO356_15355 at 3478.053 kb on + strand, within AO356_15355 at 3478.053 kb on + strand, within AO356_15355 at 3478.053 kb on + strand, within AO356_15355 at 3478.053 kb on + strand, within AO356_15355 at 3478.053 kb on + strand, within AO356_15355 at 3478.053 kb on + strand, within AO356_15355 at 3478.053 kb on + strand, within AO356_15355 at 3478.054 kb on - strand, within AO356_15355 at 3478.054 kb on - strand, within AO356_15355 at 3478.054 kb on - strand, within AO356_15355 at 3478.054 kb on - strand, within AO356_15355 at 3478.054 kb on - strand, within AO356_15355 at 3478.054 kb on - strand, within AO356_15355 at 3478.054 kb on - strand, within AO356_15355 at 3478.054 kb on - strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.196 kb on + strand, within AO356_15355 at 3478.301 kb on + strand, within AO356_15355 at 3478.394 kb on + strand, within AO356_15355 at 3478.394 kb on + strand, within AO356_15355 at 3478.394 kb on + strand, within AO356_15355 at 3478.395 kb on - strand, within AO356_15355 at 3478.660 kb on - strand at 3478.765 kb on + strand at 3478.765 kb on + strand at 3478.766 kb on - strand at 3478.785 kb on + strand at 3478.785 kb on + strand at 3478.785 kb on + strand at 3478.786 kb on - strand at 3478.786 kb on - strand at 3478.786 kb on - strand at 3478.804 kb on - strand at 3478.880 kb on + strand, within AO356_15360 at 3479.215 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction P5ss-5 phage 10-1 dilution SM calcl2 remove 3,477,830 + AO356_15355 0.30 +1.3 3,477,830 + AO356_15355 0.30 -0.2 3,477,896 + AO356_15355 0.35 +0.7 3,477,896 + AO356_15355 0.35 +0.4 3,477,897 - AO356_15355 0.36 +0.2 3,477,897 - AO356_15355 0.36 +1.0 3,477,897 - AO356_15355 0.36 +1.1 3,478,053 + AO356_15355 0.47 +1.6 3,478,053 + AO356_15355 0.47 +0.6 3,478,053 + AO356_15355 0.47 +1.2 3,478,053 + AO356_15355 0.47 +0.9 3,478,053 + AO356_15355 0.47 +1.3 3,478,053 + AO356_15355 0.47 -0.3 3,478,053 + AO356_15355 0.47 +0.1 3,478,053 + AO356_15355 0.47 +0.5 3,478,053 + AO356_15355 0.47 +1.6 3,478,054 - AO356_15355 0.47 +0.3 3,478,054 - AO356_15355 0.47 +0.6 3,478,054 - AO356_15355 0.47 +1.3 3,478,054 - AO356_15355 0.47 -0.7 3,478,054 - AO356_15355 0.47 -1.7 3,478,054 - AO356_15355 0.47 +0.8 3,478,054 - AO356_15355 0.47 -1.4 3,478,054 - AO356_15355 0.47 +2.5 3,478,055 + AO356_15355 0.47 +0.4 3,478,055 + AO356_15355 0.47 -1.4 3,478,055 + AO356_15355 0.47 -0.1 3,478,055 + AO356_15355 0.47 -0.6 3,478,055 + AO356_15355 0.47 +0.0 3,478,055 + AO356_15355 0.47 +0.9 3,478,055 + AO356_15355 0.47 +0.7 3,478,055 + AO356_15355 0.47 +0.4 3,478,055 + AO356_15355 0.47 +4.0 3,478,055 + AO356_15355 0.47 -0.7 3,478,055 + AO356_15355 0.47 +0.1 3,478,055 + AO356_15355 0.47 +1.1 3,478,055 + AO356_15355 0.47 +0.8 3,478,055 + AO356_15355 0.47 +0.0 3,478,055 + AO356_15355 0.47 +1.6 3,478,055 + AO356_15355 0.47 -0.3 3,478,055 + AO356_15355 0.47 +1.3 3,478,055 + AO356_15355 0.47 +0.9 3,478,055 + AO356_15355 0.47 -1.1 3,478,055 + AO356_15355 0.47 -0.6 3,478,056 - AO356_15355 0.48 +0.9 3,478,056 - AO356_15355 0.48 +0.2 3,478,056 - AO356_15355 0.48 +1.1 3,478,056 - AO356_15355 0.48 -0.5 3,478,056 - AO356_15355 0.48 +1.5 3,478,056 - AO356_15355 0.48 +0.1 3,478,056 - AO356_15355 0.48 +0.7 3,478,056 - AO356_15355 0.48 +1.7 3,478,056 - AO356_15355 0.48 -0.4 3,478,056 - AO356_15355 0.48 -0.2 3,478,056 - AO356_15355 0.48 -0.2 3,478,056 - AO356_15355 0.48 +2.2 3,478,056 - AO356_15355 0.48 +1.4 3,478,056 - AO356_15355 0.48 +0.8 3,478,056 - AO356_15355 0.48 +1.4 3,478,056 - AO356_15355 0.48 +1.7 3,478,056 - AO356_15355 0.48 +0.5 3,478,196 + AO356_15355 0.58 -1.4 3,478,301 + AO356_15355 0.66 -1.1 3,478,394 + AO356_15355 0.73 +0.1 3,478,394 + AO356_15355 0.73 +3.7 3,478,394 + AO356_15355 0.73 -0.1 3,478,395 - AO356_15355 0.73 +1.0 3,478,660 - -0.8 3,478,765 + +0.7 3,478,765 + -0.0 3,478,766 - -2.2 3,478,785 + +1.6 3,478,785 + -1.0 3,478,785 + +1.0 3,478,786 - +0.6 3,478,786 - -1.6 3,478,786 - +0.2 3,478,804 - +1.4 3,478,880 + AO356_15360 0.35 +0.6 3,479,215 + +0.8
Or see this region's nucleotide sequence