Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_12805

Experiment: P5ss-5 phage 10-1 dilution SM calcl2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P5ss-5 phage 10-1 dilution SM calcl2
2,917,037	+		AO356_12800	0.47	+1.2
2,917,037	+		AO356_12800	0.47	-1.2
2,917,037	+		AO356_12800	0.47	-0.3
2,917,037	+		AO356_12800	0.47	+0.3
2,917,038	-		AO356_12800	0.47	+1.1
2,917,038	-		AO356_12800	0.47	-0.8
2,917,038	-		AO356_12800	0.47	-1.3
2,917,038	-		AO356_12800	0.47	-0.7
2,917,098	+		AO356_12800	0.52	+0.0
2,917,098	+		AO356_12800	0.52	+1.6
2,917,098	+		AO356_12800	0.52	-0.8
2,917,098	+		AO356_12800	0.52	-0.5
2,917,099	-		AO356_12800	0.52	-1.1
2,917,270	+		AO356_12800	0.66	-0.6
2,917,270	+		AO356_12800	0.66	-1.5
2,917,270	+		AO356_12800	0.66	-0.2
2,917,270	+		AO356_12800	0.66	+0.3
2,917,271	-		AO356_12800	0.66	+0.1
2,917,271	-		AO356_12800	0.66	-0.9
2,917,271	-		AO356_12800	0.66	+0.3
2,917,271	-		AO356_12800	0.66	+0.1
2,917,345	+		AO356_12800	0.72	-0.8
2,917,345	+		AO356_12800	0.72	-2.2
2,917,346	-		AO356_12800	0.72	-1.8
2,917,346	-		AO356_12800	0.72	-1.5
2,917,346	-		AO356_12800	0.72	+0.2
2,917,346	-		AO356_12800	0.72	-1.5
2,917,369	+		AO356_12800	0.74	+0.0
2,917,370	-		AO356_12800	0.74	+1.1
2,917,475	+		AO356_12800	0.82	-1.1
2,917,476	-		AO356_12800	0.82	-0.2
2,917,514	-		AO356_12800	0.85	-2.3
2,917,843	+				+0.1
2,917,843	+				-2.0
2,917,844	-				-0.7
2,917,844	-				-1.7
2,917,844	-				+1.3
2,917,844	-				+3.1
2,917,860	+				+0.4
2,917,860	+				+0.6
2,917,860	+				+0.6
2,917,861	-				-0.5
2,917,906	-				+1.6
2,917,906	-				+0.5
2,917,963	+				+1.4
2,917,968	+				+1.0
2,917,969	-				+0.5
2,917,969	-				+0.9
2,917,969	-				+2.3
2,917,969	-				+0.5
2,917,969	-				-1.1
2,917,969	-				-1.5
2,918,075	+		AO356_12805	0.14	+0.4
2,918,075	+		AO356_12805	0.14	+1.3
2,918,075	+		AO356_12805	0.14	+2.3
2,918,075	+		AO356_12805	0.14	-0.8
2,918,075	+		AO356_12805	0.14	-0.5
2,918,075	+		AO356_12805	0.14	-0.5
2,918,075	+		AO356_12805	0.14	-0.9
2,918,075	+		AO356_12805	0.14	+0.3
2,918,076	-		AO356_12805	0.14	+0.5
2,918,076	-		AO356_12805	0.14	-0.4
2,918,076	-		AO356_12805	0.14	-1.2
2,918,084	+		AO356_12805	0.15	-0.4
2,918,084	+		AO356_12805	0.15	-0.8
2,918,085	-		AO356_12805	0.16	+0.9
2,918,163	+		AO356_12805	0.30	+0.6
2,918,164	-		AO356_12805	0.30	-1.0
2,918,172	+		AO356_12805	0.32	+1.4
2,918,172	+		AO356_12805	0.32	-2.3
2,918,173	-		AO356_12805	0.32	+0.8
2,918,173	-		AO356_12805	0.32	-1.6
2,918,173	-		AO356_12805	0.32	-0.2
2,918,204	+		AO356_12805	0.38	-0.8
2,918,204	+		AO356_12805	0.38	+0.4
2,918,204	+		AO356_12805	0.38	+0.1
2,918,204	+		AO356_12805	0.38	+0.9
2,918,204	+		AO356_12805	0.38	-0.2
2,918,204	+		AO356_12805	0.38	-0.5
2,918,204	+		AO356_12805	0.38	-2.6
2,918,204	+		AO356_12805	0.38	-1.5
2,918,204	+		AO356_12805	0.38	-0.6
2,918,204	+		AO356_12805	0.38	-0.9
2,918,205	-		AO356_12805	0.38	+0.1
2,918,205	-		AO356_12805	0.38	-1.3
2,918,205	-		AO356_12805	0.38	+1.1
2,918,205	-		AO356_12805	0.38	-2.2
2,918,205	-		AO356_12805	0.38	-0.1
2,918,205	-		AO356_12805	0.38	-1.1
2,918,205	-		AO356_12805	0.38	-1.4
2,918,205	-		AO356_12805	0.38	+0.1
2,918,205	-		AO356_12805	0.38	+0.1
2,918,205	-		AO356_12805	0.38	-1.6
2,918,459	+		AO356_12805	0.85	+0.2
2,918,459	+		AO356_12805	0.85	+0.8
2,918,459	+		AO356_12805	0.85	-0.5
2,918,459	+		AO356_12805	0.85	-0.5
2,918,459	+		AO356_12805	0.85	+0.1
2,918,459	+		AO356_12805	0.85	+1.2
2,918,460	-		AO356_12805	0.85	+0.8
2,918,460	-		AO356_12805	0.85	+1.1
2,918,460	-		AO356_12805	0.85	+0.2
2,918,460	-		AO356_12805	0.85	+0.6
2,918,494	-				-1.2
2,918,494	-				+1.1
2,918,540	+				-1.7
2,918,541	-				+2.2
2,918,541	-				+1.5
2,918,550	+				-0.5
2,918,550	+				-0.2
2,918,550	+				-1.1
2,918,550	+				-0.7
2,918,550	+				+0.6
2,918,550	+				+0.8
2,918,550	+				-1.9
2,918,551	-				-0.0
2,918,551	-				+0.5
2,918,551	-				+0.7
2,918,559	+				+1.7
2,918,559	+				-0.3
2,918,560	-				+0.5
2,918,560	-				+0.3
2,918,570	+				-0.6
2,918,570	+				-0.4
2,918,570	+				-1.7
2,918,571	-				-0.3
2,918,597	+				+0.4
2,918,597	+				-0.9
2,918,598	-				+0.2
2,918,598	-				+0.5
2,918,616	+				-1.1
2,918,616	+				-0.7
2,918,814	+		AO356_12810	0.21	-0.3
2,918,895	+		AO356_12810	0.39	+0.6
2,918,895	+		AO356_12810	0.39	-1.1
2,918,895	+		AO356_12810	0.39	-0.2
2,918,895	+		AO356_12810	0.39	+1.6
2,918,895	+		AO356_12810	0.39	-1.3
2,918,895	+		AO356_12810	0.39	+1.6
2,918,895	+		AO356_12810	0.39	-0.2
2,918,895	+		AO356_12810	0.39	+1.4
2,918,895	+		AO356_12810	0.39	-0.2
2,918,895	+		AO356_12810	0.39	-1.2
2,918,895	+		AO356_12810	0.39	+0.1
2,918,895	+		AO356_12810	0.39	+1.0
2,918,896	-		AO356_12810	0.39	-0.7
2,918,896	-		AO356_12810	0.39	+1.2
2,918,896	-		AO356_12810	0.39	+1.9
2,918,896	-		AO356_12810	0.39	+0.3
2,918,896	-		AO356_12810	0.39	+2.6
2,918,896	-		AO356_12810	0.39	+1.1
2,918,896	-		AO356_12810	0.39	+0.5
2,918,896	-		AO356_12810	0.39	-0.3
2,918,896	-		AO356_12810	0.39	-1.5
2,918,896	-		AO356_12810	0.39	+0.1
2,918,896	-		AO356_12810	0.39	+0.9
2,918,896	-		AO356_12810	0.39	+0.5
2,918,896	-		AO356_12810	0.39	-0.2
2,918,896	-		AO356_12810	0.39	+0.2
2,918,920	+		AO356_12810	0.44	+1.8
2,918,920	+		AO356_12810	0.44	+0.6
2,918,920	+		AO356_12810	0.44	-0.5
2,918,921	-		AO356_12810	0.44	-0.6
2,918,921	-		AO356_12810	0.44	+0.3
2,918,922	+		AO356_12810	0.44	-0.0
2,918,922	+		AO356_12810	0.44	+0.8
2,918,922	+		AO356_12810	0.44	+1.3
2,918,922	+		AO356_12810	0.44	-1.8
2,918,922	+		AO356_12810	0.44	+1.7
2,918,922	+		AO356_12810	0.44	+0.6
2,918,922	+		AO356_12810	0.44	-0.7
2,918,922	+		AO356_12810	0.44	+2.8
2,918,922	+		AO356_12810	0.44	+1.3
2,918,922	+		AO356_12810	0.44	-0.7
2,918,922	+		AO356_12810	0.44	+0.4
2,918,922	+		AO356_12810	0.44	+0.2
2,918,923	-		AO356_12810	0.45	+0.5
2,918,923	-		AO356_12810	0.45	+0.2
2,918,923	-		AO356_12810	0.45	+0.7
2,918,923	-		AO356_12810	0.45	+0.7
2,918,923	-		AO356_12810	0.45	-0.7
2,918,923	-		AO356_12810	0.45	-0.2
2,918,923	-		AO356_12810	0.45	+0.2
2,918,923	-		AO356_12810	0.45	+1.0
2,918,923	-		AO356_12810	0.45	+3.0
2,918,923	-		AO356_12810	0.45	+1.5
2,918,923	-		AO356_12810	0.45	+0.3
2,918,991	+		AO356_12810	0.59	+0.9
2,919,329	+		AO356_12815	0.12	-1.8
2,919,329	+		AO356_12815	0.12	+0.6
2,919,330	-		AO356_12815	0.12	-0.4
2,919,330	-		AO356_12815	0.12	+0.4
2,919,330	-		AO356_12815	0.12	+0.3
2,919,480	+		AO356_12815	0.35	+0.3
2,919,481	-		AO356_12815	0.35	+1.1
2,919,481	-		AO356_12815	0.35	+1.5
2,919,482	+		AO356_12815	0.35	+0.6
2,919,482	+		AO356_12815	0.35	+0.6
2,919,482	+		AO356_12815	0.35	-2.3
2,919,482	+		AO356_12815	0.35	-2.3
2,919,482	+		AO356_12815	0.35	+1.6
2,919,482	+		AO356_12815	0.35	+2.2
2,919,482	+		AO356_12815	0.35	-0.4
2,919,482	+		AO356_12815	0.35	+0.7
2,919,482	+		AO356_12815	0.35	+1.0
2,919,482	+		AO356_12815	0.35	+1.0
2,919,482	+		AO356_12815	0.35	-0.3
2,919,483	-		AO356_12815	0.35	+1.1
2,919,483	-		AO356_12815	0.35	+0.9
2,919,483	-		AO356_12815	0.35	+1.7
2,919,483	-		AO356_12815	0.35	+0.6
2,919,483	-		AO356_12815	0.35	-1.9
2,919,483	-		AO356_12815	0.35	-0.9
2,919,483	-		AO356_12815	0.35	+0.8
2,919,483	-		AO356_12815	0.35	+0.1
2,919,483	-		AO356_12815	0.35	+0.6
2,919,483	-		AO356_12815	0.35	+0.5
2,919,483	-		AO356_12815	0.35	+0.2
2,919,483	-		AO356_12815	0.35	+0.7
2,919,483	-		AO356_12815	0.35	-1.5