Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_11500

Experiment: P5ss-5 phage 10-1 dilution SM calcl2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P5ss-5 phage 10-1 dilution SM calcl2
2,606,328	+		AO356_11490	0.87	+0.1
2,606,328	+		AO356_11490	0.87	-0.3
2,606,329	-		AO356_11490	0.87	+0.1
2,606,329	-		AO356_11490	0.87	-0.6
2,606,329	-		AO356_11490	0.87	-0.9
2,606,329	-		AO356_11490	0.87	-1.6
2,606,440	+				+0.2
2,606,440	+				-1.8
2,606,440	+				-1.1
2,606,440	+				+0.4
2,606,440	+				-0.8
2,606,440	+				+0.2
2,606,440	+				-1.4
2,606,440	+				+2.6
2,606,441	-				+0.4
2,606,441	-				-2.1
2,606,441	-				-0.8
2,606,441	-				-2.0
2,606,441	-				-2.1
2,606,518	+		AO356_11495	0.12	-1.0
2,606,761	+		AO356_11495	0.43	-1.9
2,606,761	+		AO356_11495	0.43	-1.5
2,606,762	-		AO356_11495	0.43	+2.6
2,606,762	-		AO356_11495	0.43	-0.4
2,606,762	-		AO356_11495	0.43	+0.6
2,606,762	-		AO356_11495	0.43	-0.1
2,606,821	-		AO356_11495	0.51	-2.1
2,606,915	+		AO356_11495	0.62	+2.3
2,606,997	+		AO356_11495	0.73	-0.6
2,606,997	+		AO356_11495	0.73	-1.6
2,606,997	+		AO356_11495	0.73	-1.9
2,606,997	+		AO356_11495	0.73	-1.0
2,606,997	+		AO356_11495	0.73	-0.8
2,606,997	+		AO356_11495	0.73	-1.0
2,606,997	+		AO356_11495	0.73	-1.8
2,606,998	-		AO356_11495	0.73	-0.8
2,606,998	-		AO356_11495	0.73	-0.5
2,606,998	-		AO356_11495	0.73	-2.2
2,606,998	-		AO356_11495	0.73	-1.2
2,607,208	+				+0.9
2,607,233	+				-1.5
2,607,234	-				+0.0
2,607,234	-				-1.8
2,607,316	+				-0.6
2,607,317	-				-0.3
2,607,317	-				+0.4
2,607,464	+		AO356_11500	0.30	-1.0
2,607,465	-		AO356_11500	0.30	-0.8
2,607,488	+		AO356_11500	0.34	-0.5
2,607,488	+		AO356_11500	0.34	+0.6
2,607,488	+		AO356_11500	0.34	-2.4
2,607,488	+		AO356_11500	0.34	-1.5
2,607,488	+		AO356_11500	0.34	-2.7
2,607,488	+		AO356_11500	0.34	+1.1
2,607,489	-		AO356_11500	0.34	-2.4
2,607,489	-		AO356_11500	0.34	-1.3
2,607,489	-		AO356_11500	0.34	-2.4
2,607,489	-		AO356_11500	0.34	-1.7
2,607,489	-		AO356_11500	0.34	-1.6
2,607,489	-		AO356_11500	0.34	+0.8
2,607,489	-		AO356_11500	0.34	+0.9
2,607,489	-		AO356_11500	0.34	-0.6
2,607,489	-		AO356_11500	0.34	-0.3
2,607,528	+		AO356_11500	0.39	-0.1
2,607,528	+		AO356_11500	0.39	-2.6
2,607,529	-		AO356_11500	0.39	-1.2
2,607,741	+		AO356_11500	0.69	-0.7
2,607,741	+		AO356_11500	0.69	-0.4
2,607,791	+		AO356_11500	0.76	+0.5
2,607,791	+		AO356_11500	0.76	-0.4
2,607,792	-		AO356_11500	0.76	+1.9
2,607,804	+		AO356_11500	0.78	+0.6
2,607,804	+		AO356_11500	0.78	-1.1
2,607,804	+		AO356_11500	0.78	-0.8
2,607,805	-		AO356_11500	0.78	+0.2
2,607,805	-		AO356_11500	0.78	-1.6
2,607,805	-		AO356_11500	0.78	-1.4
2,607,960	-				+0.0
2,608,037	+				-0.7
2,608,037	+				+1.5
2,608,037	+				-2.1
2,608,037	+				+1.0
2,608,038	-				-1.0
2,608,038	-				+0.6
2,608,038	-				-2.2
2,608,038	-				-1.0
2,608,038	-				-2.0
2,608,038	-				+0.2
2,608,045	+				-1.8
2,608,045	+				-0.6
2,608,045	+				+0.3
2,608,045	+				-1.1
2,608,045	+				-1.0
2,608,046	-				-0.5
2,608,046	-				-0.6
2,608,046	-				-0.6
2,608,046	-				-0.5
2,608,046	-				+0.2
2,608,046	-				+1.3
2,608,046	-				+0.9
2,608,046	-				-0.7
2,608,046	-				+1.7
2,608,154	+				+1.0
2,608,155	-				+0.4
2,608,313	+				+1.1
2,608,313	+				+0.3
2,608,313	+				+1.0
2,608,313	+				-0.1
2,608,313	+				+0.2
2,608,313	+				+1.3
2,608,313	+				+1.8
2,608,313	+				-2.0
2,608,313	+				+0.4
2,608,313	+				+1.8
2,608,314	-				-0.6
2,608,314	-				+1.2
2,608,314	-				-0.6
2,608,314	-				-1.8
2,608,314	-				+0.7
2,608,314	-				+0.3
2,608,314	-				-0.7
2,608,314	-				-2.3
2,608,314	-				-1.0
2,608,314	-				-1.5
2,608,314	-				-1.1
2,608,314	-				-2.2
2,608,314	-				-1.0
2,608,314	-				-0.4
2,608,315	+				-0.3
2,608,315	+				-0.6
2,608,315	+				+0.4
2,608,315	+				+1.5
2,608,315	+				-1.9
2,608,315	+				-2.0
2,608,315	+				-2.2
2,608,315	+				+0.6
2,608,316	-				-2.3
2,608,316	-				-0.7
2,608,316	-				-0.9
2,608,316	-				+2.5
2,608,316	-				+1.7
2,608,316	-				-1.2
2,608,316	-				-0.1
2,608,330	+				+0.4
2,608,330	+				-1.5
2,608,330	+				+1.5
2,608,330	+				-0.6
2,608,330	+				-0.5
2,608,330	+				+2.0
2,608,330	+				-1.5
2,608,330	+				+0.7
2,608,330	+				-2.1
2,608,330	+				+1.4
2,608,330	+				+2.1
2,608,330	+				+0.6
2,608,330	+				+1.8
2,608,330	+				-0.3
2,608,330	+				-1.1
2,608,330	+				-0.2
2,608,330	+				+0.6
2,608,330	+				-0.7
2,608,331	-				-1.3
2,608,331	-				+0.2
2,608,331	-				+1.3
2,608,331	-				+0.2
2,608,331	-				-1.3
2,608,331	-				-1.4
2,608,331	-				-0.2
2,608,331	-				+1.0
2,608,331	-				-0.4
2,608,331	-				-0.7
2,608,409	+		AO356_11505	0.13	+0.3
2,608,409	+		AO356_11505	0.13	-0.8
2,608,409	+		AO356_11505	0.13	-0.6
2,608,409	+		AO356_11505	0.13	-1.1
2,608,409	+		AO356_11505	0.13	+1.4
2,608,409	+		AO356_11505	0.13	+1.5
2,608,409	+		AO356_11505	0.13	-0.6
2,608,409	+		AO356_11505	0.13	+1.1
2,608,410	-		AO356_11505	0.13	-2.4
2,608,410	-		AO356_11505	0.13	+1.2
2,608,410	-		AO356_11505	0.13	+0.3
2,608,410	-		AO356_11505	0.13	+1.2
2,608,410	-		AO356_11505	0.13	-1.1
2,608,410	-		AO356_11505	0.13	-0.9
2,608,779	+		AO356_11505	0.30	-0.2
2,608,779	+		AO356_11505	0.30	+0.6
2,608,779	+		AO356_11505	0.30	-2.2
2,608,779	+		AO356_11505	0.30	-0.2
2,608,779	+		AO356_11505	0.30	-0.6
2,608,779	+		AO356_11505	0.30	+0.1
2,608,780	-		AO356_11505	0.30	-1.6
2,608,780	-		AO356_11505	0.30	-2.3
2,608,780	-		AO356_11505	0.30	-0.9
2,608,780	-		AO356_11505	0.30	+1.4
2,608,780	-		AO356_11505	0.30	-0.2
2,608,780	-		AO356_11505	0.30	-0.8
2,608,780	-		AO356_11505	0.30	-1.4
2,608,802	-		AO356_11505	0.31	-1.7
2,608,802	-		AO356_11505	0.31	+0.6
2,608,802	-		AO356_11505	0.31	+0.0
2,608,802	-		AO356_11505	0.31	+0.3
2,608,846	+		AO356_11505	0.33	-1.6
2,608,846	+		AO356_11505	0.33	-0.7
2,608,846	+		AO356_11505	0.33	+0.2
2,608,847	-		AO356_11505	0.33	-1.3
2,608,847	-		AO356_11505	0.33	-0.6
2,608,847	-		AO356_11505	0.33	-1.5
2,608,906	+		AO356_11505	0.36	-0.3
2,608,906	+		AO356_11505	0.36	-1.8
2,608,906	+		AO356_11505	0.36	-0.0
2,608,906	+		AO356_11505	0.36	-1.6
2,608,907	-		AO356_11505	0.36	-1.1
2,608,907	-		AO356_11505	0.36	-0.4
2,608,907	-		AO356_11505	0.36	-1.3
2,608,907	-		AO356_11505	0.36	+0.3
2,608,928	-		AO356_11505	0.37	+0.8
2,608,928	-		AO356_11505	0.37	+0.8