Experiment: P5ss-5 phage 10-1 dilution SM calcl2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_10605 and AO356_10610 are separated by 32 nucleotides AO356_10610 and AO356_10615 are separated by 356 nucleotides
AO356_10605: AO356_10605 - peptide transporter, at 2,412,520 to 2,416,086
_10605
AO356_10610: AO356_10610 - polyketide cyclase, at 2,416,119 to 2,416,583
_10610
AO356_10615: AO356_10615 - chemotaxis protein, at 2,416,940 to 2,418,820
_10615
Position (kb)
2416
2417 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2415.199 kb on + strand, within AO356_10605 at 2415.199 kb on + strand, within AO356_10605 at 2415.199 kb on + strand, within AO356_10605 at 2415.199 kb on + strand, within AO356_10605 at 2415.200 kb on - strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.309 kb on - strand, within AO356_10605 at 2415.484 kb on + strand, within AO356_10605 at 2415.484 kb on + strand, within AO356_10605 at 2415.484 kb on + strand, within AO356_10605 at 2415.484 kb on + strand, within AO356_10605 at 2415.484 kb on + strand, within AO356_10605 at 2415.485 kb on - strand, within AO356_10605 at 2415.752 kb on - strand at 2415.811 kb on + strand at 2415.812 kb on - strand at 2415.812 kb on - strand at 2415.812 kb on - strand at 2415.812 kb on - strand at 2415.812 kb on - strand at 2415.928 kb on + strand at 2415.929 kb on - strand at 2415.929 kb on - strand at 2415.929 kb on - strand at 2415.929 kb on - strand at 2416.043 kb on + strand at 2416.044 kb on - strand at 2416.044 kb on - strand at 2416.044 kb on - strand at 2416.061 kb on - strand at 2416.061 kb on - strand at 2416.395 kb on + strand, within AO356_10610 at 2416.395 kb on + strand, within AO356_10610 at 2416.396 kb on - strand, within AO356_10610 at 2416.396 kb on - strand, within AO356_10610 at 2416.396 kb on - strand, within AO356_10610 at 2416.581 kb on + strand at 2416.581 kb on + strand at 2416.581 kb on + strand at 2416.581 kb on + strand at 2416.581 kb on + strand at 2416.581 kb on + strand at 2416.582 kb on - strand at 2416.582 kb on - strand at 2416.582 kb on - strand at 2416.582 kb on - strand at 2416.582 kb on - strand at 2416.582 kb on - strand at 2416.582 kb on - strand at 2417.309 kb on - strand, within AO356_10615
Per-strain Table
Position Strand Gene LocusTag Fraction P5ss-5 phage 10-1 dilution SM calcl2 remove 2,415,199 + AO356_10605 0.75 -0.7 2,415,199 + AO356_10605 0.75 -1.3 2,415,199 + AO356_10605 0.75 -0.9 2,415,199 + AO356_10605 0.75 -3.2 2,415,200 - AO356_10605 0.75 +0.2 2,415,308 + AO356_10605 0.78 +0.4 2,415,308 + AO356_10605 0.78 +0.6 2,415,308 + AO356_10605 0.78 +1.0 2,415,308 + AO356_10605 0.78 +0.3 2,415,308 + AO356_10605 0.78 +0.4 2,415,308 + AO356_10605 0.78 +0.4 2,415,308 + AO356_10605 0.78 -1.2 2,415,308 + AO356_10605 0.78 -2.3 2,415,309 - AO356_10605 0.78 +0.5 2,415,484 + AO356_10605 0.83 -0.1 2,415,484 + AO356_10605 0.83 +0.2 2,415,484 + AO356_10605 0.83 -2.1 2,415,484 + AO356_10605 0.83 -1.8 2,415,484 + AO356_10605 0.83 -0.4 2,415,485 - AO356_10605 0.83 -0.8 2,415,752 - -1.5 2,415,811 + -0.1 2,415,812 - +0.7 2,415,812 - -0.8 2,415,812 - +0.0 2,415,812 - -0.8 2,415,812 - -0.6 2,415,928 + -0.3 2,415,929 - +1.3 2,415,929 - -0.5 2,415,929 - +0.1 2,415,929 - -0.9 2,416,043 + -0.9 2,416,044 - +1.5 2,416,044 - -0.1 2,416,044 - -0.0 2,416,061 - -0.5 2,416,061 - +1.0 2,416,395 + AO356_10610 0.59 -2.2 2,416,395 + AO356_10610 0.59 -1.7 2,416,396 - AO356_10610 0.60 -1.9 2,416,396 - AO356_10610 0.60 +1.4 2,416,396 - AO356_10610 0.60 -0.2 2,416,581 + -1.9 2,416,581 + +1.4 2,416,581 + -0.7 2,416,581 + +0.1 2,416,581 + +1.4 2,416,581 + +1.0 2,416,582 - -0.2 2,416,582 - -2.5 2,416,582 - +0.7 2,416,582 - -1.5 2,416,582 - +0.7 2,416,582 - -0.7 2,416,582 - -1.7 2,417,309 - AO356_10615 0.20 +0.0
Or see this region's nucleotide sequence