Experiment: P5ss-5 phage 10-1 dilution SM calcl2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_09935 and AO356_09940 overlap by 11 nucleotides
AO356_09935: AO356_09935 - hypothetical protein, at 2,244,955 to 2,245,950
_09935
AO356_09940: AO356_09940 - hypothetical protein, at 2,245,940 to 2,246,323
_09940
Position (kb)
2245
2246
2247 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2245.012 kb on + strand at 2245.013 kb on - strand at 2245.095 kb on + strand, within AO356_09935 at 2245.164 kb on - strand, within AO356_09935 at 2245.195 kb on - strand, within AO356_09935 at 2245.318 kb on + strand, within AO356_09935 at 2245.319 kb on - strand, within AO356_09935 at 2245.345 kb on - strand, within AO356_09935 at 2245.368 kb on + strand, within AO356_09935 at 2245.369 kb on - strand, within AO356_09935 at 2245.372 kb on - strand, within AO356_09935 at 2245.413 kb on + strand, within AO356_09935 at 2245.419 kb on - strand, within AO356_09935 at 2245.485 kb on + strand, within AO356_09935 at 2245.485 kb on + strand, within AO356_09935 at 2245.486 kb on - strand, within AO356_09935 at 2245.486 kb on - strand, within AO356_09935 at 2245.486 kb on - strand, within AO356_09935 at 2245.493 kb on - strand, within AO356_09935 at 2245.493 kb on - strand, within AO356_09935 at 2245.539 kb on + strand, within AO356_09935 at 2245.539 kb on + strand, within AO356_09935 at 2245.609 kb on + strand, within AO356_09935 at 2245.610 kb on - strand, within AO356_09935 at 2245.657 kb on - strand, within AO356_09935 at 2245.676 kb on - strand, within AO356_09935 at 2245.677 kb on + strand, within AO356_09935 at 2245.679 kb on + strand, within AO356_09935 at 2245.679 kb on + strand, within AO356_09935 at 2245.679 kb on + strand, within AO356_09935 at 2245.679 kb on + strand, within AO356_09935 at 2245.679 kb on + strand, within AO356_09935 at 2245.679 kb on + strand, within AO356_09935 at 2245.718 kb on + strand, within AO356_09935 at 2245.719 kb on - strand, within AO356_09935 at 2245.725 kb on + strand, within AO356_09935 at 2245.737 kb on + strand, within AO356_09935 at 2245.737 kb on + strand, within AO356_09935 at 2245.812 kb on + strand, within AO356_09935 at 2245.817 kb on - strand, within AO356_09935 at 2245.882 kb on - strand at 2245.882 kb on - strand at 2245.915 kb on + strand at 2245.916 kb on - strand at 2246.099 kb on + strand, within AO356_09940 at 2246.099 kb on + strand, within AO356_09940 at 2246.455 kb on + strand at 2246.757 kb on + strand at 2247.050 kb on + strand at 2247.080 kb on + strand at 2247.081 kb on - strand at 2247.081 kb on - strand at 2247.082 kb on + strand at 2247.082 kb on + strand at 2247.083 kb on - strand at 2247.083 kb on - strand at 2247.083 kb on - strand at 2247.083 kb on - strand at 2247.120 kb on + strand at 2247.121 kb on - strand at 2247.121 kb on - strand at 2247.153 kb on + strand at 2247.164 kb on - strand at 2247.164 kb on - strand at 2247.164 kb on - strand at 2247.164 kb on - strand at 2247.175 kb on + strand at 2247.175 kb on + strand at 2247.175 kb on + strand at 2247.176 kb on - strand at 2247.176 kb on - strand at 2247.187 kb on + strand at 2247.187 kb on + strand at 2247.188 kb on - strand at 2247.244 kb on + strand at 2247.274 kb on - strand at 2247.279 kb on - strand at 2247.287 kb on + strand at 2247.287 kb on + strand at 2247.287 kb on + strand at 2247.288 kb on - strand at 2247.288 kb on - strand at 2247.288 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction P5ss-5 phage 10-1 dilution SM calcl2 remove 2,245,012 + -1.8 2,245,013 - -0.3 2,245,095 + AO356_09935 0.14 +0.4 2,245,164 - AO356_09935 0.21 +1.2 2,245,195 - AO356_09935 0.24 +0.2 2,245,318 + AO356_09935 0.36 -0.6 2,245,319 - AO356_09935 0.37 +0.4 2,245,345 - AO356_09935 0.39 -1.0 2,245,368 + AO356_09935 0.41 +0.7 2,245,369 - AO356_09935 0.42 -0.9 2,245,372 - AO356_09935 0.42 -0.7 2,245,413 + AO356_09935 0.46 -0.6 2,245,419 - AO356_09935 0.47 +0.2 2,245,485 + AO356_09935 0.53 +0.7 2,245,485 + AO356_09935 0.53 +0.5 2,245,486 - AO356_09935 0.53 +0.3 2,245,486 - AO356_09935 0.53 -1.8 2,245,486 - AO356_09935 0.53 +2.3 2,245,493 - AO356_09935 0.54 +0.1 2,245,493 - AO356_09935 0.54 +0.4 2,245,539 + AO356_09935 0.59 -1.8 2,245,539 + AO356_09935 0.59 -0.2 2,245,609 + AO356_09935 0.66 +0.6 2,245,610 - AO356_09935 0.66 -0.2 2,245,657 - AO356_09935 0.70 -0.3 2,245,676 - AO356_09935 0.72 +1.1 2,245,677 + AO356_09935 0.72 -1.4 2,245,679 + AO356_09935 0.73 -0.1 2,245,679 + AO356_09935 0.73 +0.3 2,245,679 + AO356_09935 0.73 -2.6 2,245,679 + AO356_09935 0.73 -0.6 2,245,679 + AO356_09935 0.73 +0.3 2,245,679 + AO356_09935 0.73 +1.7 2,245,718 + AO356_09935 0.77 -1.3 2,245,719 - AO356_09935 0.77 +0.3 2,245,725 + AO356_09935 0.77 -1.0 2,245,737 + AO356_09935 0.79 -0.3 2,245,737 + AO356_09935 0.79 -1.2 2,245,812 + AO356_09935 0.86 -0.1 2,245,817 - AO356_09935 0.87 +0.2 2,245,882 - +0.5 2,245,882 - -0.9 2,245,915 + +0.6 2,245,916 - +0.4 2,246,099 + AO356_09940 0.41 -1.4 2,246,099 + AO356_09940 0.41 -2.1 2,246,455 + +0.5 2,246,757 + -0.1 2,247,050 + -0.6 2,247,080 + -0.1 2,247,081 - +0.1 2,247,081 - -1.2 2,247,082 + +0.9 2,247,082 + +0.0 2,247,083 - +0.6 2,247,083 - -0.8 2,247,083 - -0.2 2,247,083 - +0.6 2,247,120 + +1.1 2,247,121 - -1.3 2,247,121 - +1.0 2,247,153 + -0.6 2,247,164 - +0.3 2,247,164 - -0.1 2,247,164 - +0.6 2,247,164 - +0.4 2,247,175 + -1.7 2,247,175 + +0.6 2,247,175 + -1.0 2,247,176 - -1.3 2,247,176 - -1.3 2,247,187 + -1.0 2,247,187 + -0.1 2,247,188 - -0.5 2,247,244 + -2.9 2,247,274 - +0.9 2,247,279 - +0.2 2,247,287 + -1.6 2,247,287 + +0.7 2,247,287 + +0.0 2,247,288 - -0.7 2,247,288 - +0.1 2,247,288 - -1.6
Or see this region's nucleotide sequence