Experiment: P5ss-5 phage 10-1 dilution SM calcl2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_08740 and AO356_08745 are separated by 544 nucleotides AO356_08745 and AO356_08750 are separated by 179 nucleotides
AO356_08740: AO356_08740 - histidine kinase, at 1,967,959 to 1,969,476
_08740
AO356_08745: AO356_08745 - hypothetical protein, at 1,970,021 to 1,970,725
_08745
AO356_08750: AO356_08750 - DNA topoisomerase IV, at 1,970,905 to 1,973,169
_08750
Position (kb)
1970
1971 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1969.493 kb on + strand at 1969.493 kb on + strand at 1969.493 kb on + strand at 1969.493 kb on + strand at 1969.493 kb on + strand at 1969.494 kb on - strand at 1969.494 kb on - strand at 1969.933 kb on + strand at 1969.933 kb on + strand at 1970.006 kb on + strand at 1970.007 kb on - strand at 1970.007 kb on - strand at 1970.007 kb on - strand at 1970.007 kb on - strand at 1970.008 kb on + strand at 1970.008 kb on + strand at 1970.008 kb on + strand at 1970.008 kb on + strand at 1970.008 kb on + strand at 1970.008 kb on + strand at 1970.008 kb on + strand at 1970.009 kb on - strand at 1970.009 kb on - strand at 1970.009 kb on - strand at 1970.009 kb on - strand at 1970.047 kb on + strand at 1970.366 kb on + strand, within AO356_08745 at 1970.366 kb on + strand, within AO356_08745 at 1970.366 kb on + strand, within AO356_08745 at 1970.366 kb on + strand, within AO356_08745 at 1970.366 kb on + strand, within AO356_08745 at 1970.366 kb on + strand, within AO356_08745 at 1970.367 kb on - strand, within AO356_08745 at 1970.367 kb on - strand, within AO356_08745 at 1970.367 kb on - strand, within AO356_08745 at 1970.557 kb on - strand, within AO356_08745 at 1970.557 kb on - strand, within AO356_08745 at 1970.585 kb on + strand, within AO356_08745 at 1970.586 kb on - strand, within AO356_08745 at 1970.586 kb on - strand, within AO356_08745 at 1970.640 kb on + strand, within AO356_08745 at 1970.640 kb on + strand, within AO356_08745 at 1970.641 kb on - strand, within AO356_08745 at 1970.641 kb on - strand, within AO356_08745 at 1970.641 kb on - strand, within AO356_08745 at 1970.704 kb on + strand at 1970.821 kb on + strand at 1970.821 kb on + strand at 1970.821 kb on + strand at 1970.821 kb on + strand at 1970.822 kb on - strand at 1970.822 kb on - strand at 1970.822 kb on - strand at 1970.822 kb on - strand at 1970.822 kb on - strand at 1970.834 kb on + strand at 1970.834 kb on + strand at 1970.834 kb on + strand at 1970.835 kb on - strand at 1970.835 kb on - strand at 1970.897 kb on + strand at 1970.897 kb on + strand at 1970.897 kb on + strand at 1970.897 kb on + strand at 1970.897 kb on + strand at 1970.897 kb on + strand at 1970.897 kb on + strand at 1970.897 kb on + strand at 1970.897 kb on + strand at 1970.898 kb on - strand at 1970.898 kb on - strand at 1970.898 kb on - strand at 1970.898 kb on - strand at 1970.898 kb on - strand at 1970.900 kb on + strand at 1970.900 kb on + strand at 1970.900 kb on + strand at 1970.901 kb on - strand at 1970.901 kb on - strand at 1970.901 kb on - strand at 1970.906 kb on + strand at 1970.907 kb on - strand at 1970.907 kb on - strand at 1970.907 kb on - strand at 1970.907 kb on - strand at 1970.907 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction P5ss-5 phage 10-1 dilution SM calcl2 remove 1,969,493 + +0.2 1,969,493 + -2.3 1,969,493 + +2.1 1,969,493 + +0.3 1,969,493 + -1.4 1,969,494 - -1.8 1,969,494 - -2.1 1,969,933 + -0.7 1,969,933 + +1.1 1,970,006 + +1.5 1,970,007 - +0.2 1,970,007 - -0.2 1,970,007 - +0.2 1,970,007 - -1.4 1,970,008 + -0.2 1,970,008 + +1.2 1,970,008 + -1.0 1,970,008 + -1.6 1,970,008 + +1.3 1,970,008 + -0.3 1,970,008 + +0.7 1,970,009 - -0.5 1,970,009 - +0.7 1,970,009 - -1.0 1,970,009 - -2.2 1,970,047 + -1.2 1,970,366 + AO356_08745 0.49 -0.5 1,970,366 + AO356_08745 0.49 -1.3 1,970,366 + AO356_08745 0.49 -0.1 1,970,366 + AO356_08745 0.49 +1.4 1,970,366 + AO356_08745 0.49 +0.7 1,970,366 + AO356_08745 0.49 +0.0 1,970,367 - AO356_08745 0.49 -1.6 1,970,367 - AO356_08745 0.49 -0.8 1,970,367 - AO356_08745 0.49 -2.4 1,970,557 - AO356_08745 0.76 +1.2 1,970,557 - AO356_08745 0.76 +0.8 1,970,585 + AO356_08745 0.80 -1.3 1,970,586 - AO356_08745 0.80 -0.4 1,970,586 - AO356_08745 0.80 +1.3 1,970,640 + AO356_08745 0.88 -1.2 1,970,640 + AO356_08745 0.88 +1.2 1,970,641 - AO356_08745 0.88 -0.0 1,970,641 - AO356_08745 0.88 -0.3 1,970,641 - AO356_08745 0.88 +0.5 1,970,704 + +0.4 1,970,821 + -0.3 1,970,821 + -1.6 1,970,821 + +0.2 1,970,821 + -2.2 1,970,822 - +0.4 1,970,822 - -0.8 1,970,822 - +0.5 1,970,822 - +0.0 1,970,822 - -2.1 1,970,834 + +0.9 1,970,834 + +0.4 1,970,834 + +1.6 1,970,835 - +0.5 1,970,835 - +1.4 1,970,897 + +1.1 1,970,897 + +0.7 1,970,897 + -0.9 1,970,897 + +0.4 1,970,897 + +0.7 1,970,897 + -0.5 1,970,897 + +1.6 1,970,897 + -0.8 1,970,897 + +0.0 1,970,898 - -1.6 1,970,898 - +0.4 1,970,898 - +0.9 1,970,898 - -0.2 1,970,898 - +0.7 1,970,900 + +0.4 1,970,900 + +0.2 1,970,900 + +0.6 1,970,901 - -0.0 1,970,901 - -0.2 1,970,901 - -1.5 1,970,906 + +0.1 1,970,907 - -0.7 1,970,907 - -0.9 1,970,907 - -0.8 1,970,907 - +0.0 1,970,907 - -1.1
Or see this region's nucleotide sequence