Experiment: P5ss-5 phage 10-1 dilution SM calcl2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_07510 and AO356_07515 are separated by 75 nucleotides AO356_07515 and AO356_07520 are separated by 97 nucleotides AO356_07520 and AO356_07525 are separated by 59 nucleotides AO356_07525 and AO356_07530 overlap by 4 nucleotides
AO356_07510: AO356_07510 - DNA repair protein RecN, at 1,663,384 to 1,665,057
_07510
AO356_07515: AO356_07515 - Fur family transcriptional regulator, at 1,665,133 to 1,665,537
_07515
AO356_07520: AO356_07520 - hypothetical protein, at 1,665,635 to 1,666,162
_07520
AO356_07525: AO356_07525 - protein RnfH, at 1,666,222 to 1,666,524
_07525
AO356_07530: AO356_07530 - ribosome association toxin RatA, at 1,666,521 to 1,666,964
_07530
Position (kb)
1665
1666 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1664.281 kb on + strand, within AO356_07510 at 1664.282 kb on - strand, within AO356_07510 at 1664.282 kb on - strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.310 kb on + strand, within AO356_07510 at 1664.311 kb on - strand, within AO356_07510 at 1664.311 kb on - strand, within AO356_07510 at 1664.440 kb on + strand, within AO356_07510 at 1664.440 kb on + strand, within AO356_07510 at 1664.440 kb on + strand, within AO356_07510 at 1664.440 kb on + strand, within AO356_07510 at 1664.440 kb on + strand, within AO356_07510 at 1664.440 kb on + strand, within AO356_07510 at 1664.440 kb on + strand, within AO356_07510 at 1664.440 kb on + strand, within AO356_07510 at 1664.440 kb on + strand, within AO356_07510 at 1664.441 kb on - strand, within AO356_07510 at 1664.441 kb on - strand, within AO356_07510 at 1664.441 kb on - strand, within AO356_07510 at 1664.441 kb on - strand, within AO356_07510 at 1664.441 kb on - strand, within AO356_07510 at 1664.441 kb on - strand, within AO356_07510 at 1664.441 kb on - strand, within AO356_07510 at 1664.441 kb on - strand, within AO356_07510 at 1664.441 kb on - strand, within AO356_07510 at 1664.453 kb on - strand, within AO356_07510 at 1664.453 kb on - strand, within AO356_07510 at 1664.756 kb on + strand, within AO356_07510 at 1664.756 kb on + strand, within AO356_07510 at 1664.757 kb on - strand, within AO356_07510 at 1664.757 kb on - strand, within AO356_07510 at 1664.894 kb on + strand at 1664.894 kb on + strand at 1664.895 kb on - strand at 1665.134 kb on + strand at 1665.134 kb on + strand at 1665.135 kb on - strand at 1665.135 kb on - strand at 1665.135 kb on - strand at 1666.160 kb on + strand at 1666.224 kb on - strand at 1666.502 kb on + strand at 1666.502 kb on + strand at 1666.503 kb on - strand at 1666.503 kb on - strand at 1666.503 kb on - strand at 1666.514 kb on - strand at 1666.514 kb on - strand at 1666.514 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction P5ss-5 phage 10-1 dilution SM calcl2 remove 1,664,281 + AO356_07510 0.54 +2.0 1,664,282 - AO356_07510 0.54 -0.5 1,664,282 - AO356_07510 0.54 -1.9 1,664,308 + AO356_07510 0.55 -2.6 1,664,308 + AO356_07510 0.55 +0.9 1,664,308 + AO356_07510 0.55 +0.8 1,664,308 + AO356_07510 0.55 -0.6 1,664,308 + AO356_07510 0.55 +0.3 1,664,308 + AO356_07510 0.55 -1.5 1,664,308 + AO356_07510 0.55 +0.3 1,664,308 + AO356_07510 0.55 -2.0 1,664,308 + AO356_07510 0.55 -0.9 1,664,308 + AO356_07510 0.55 -0.4 1,664,308 + AO356_07510 0.55 -2.2 1,664,308 + AO356_07510 0.55 -0.7 1,664,308 + AO356_07510 0.55 -1.2 1,664,308 + AO356_07510 0.55 +0.7 1,664,308 + AO356_07510 0.55 +0.0 1,664,308 + AO356_07510 0.55 -0.9 1,664,308 + AO356_07510 0.55 -0.6 1,664,308 + AO356_07510 0.55 +0.6 1,664,308 + AO356_07510 0.55 -0.2 1,664,309 - AO356_07510 0.55 +0.7 1,664,309 - AO356_07510 0.55 -0.9 1,664,309 - AO356_07510 0.55 -0.8 1,664,309 - AO356_07510 0.55 -0.7 1,664,309 - AO356_07510 0.55 -0.1 1,664,309 - AO356_07510 0.55 -1.1 1,664,309 - AO356_07510 0.55 +0.8 1,664,309 - AO356_07510 0.55 +0.3 1,664,309 - AO356_07510 0.55 +0.3 1,664,309 - AO356_07510 0.55 -2.9 1,664,309 - AO356_07510 0.55 +0.7 1,664,309 - AO356_07510 0.55 +0.6 1,664,309 - AO356_07510 0.55 +0.4 1,664,309 - AO356_07510 0.55 -0.9 1,664,309 - AO356_07510 0.55 +0.8 1,664,309 - AO356_07510 0.55 -0.0 1,664,309 - AO356_07510 0.55 -1.5 1,664,309 - AO356_07510 0.55 -0.8 1,664,310 + AO356_07510 0.55 -0.5 1,664,311 - AO356_07510 0.55 +1.5 1,664,311 - AO356_07510 0.55 -0.7 1,664,440 + AO356_07510 0.63 -0.7 1,664,440 + AO356_07510 0.63 +0.1 1,664,440 + AO356_07510 0.63 -1.9 1,664,440 + AO356_07510 0.63 +1.5 1,664,440 + AO356_07510 0.63 -0.9 1,664,440 + AO356_07510 0.63 -1.6 1,664,440 + AO356_07510 0.63 -1.0 1,664,440 + AO356_07510 0.63 -0.6 1,664,440 + AO356_07510 0.63 -1.3 1,664,441 - AO356_07510 0.63 +0.9 1,664,441 - AO356_07510 0.63 +1.0 1,664,441 - AO356_07510 0.63 -0.5 1,664,441 - AO356_07510 0.63 -0.5 1,664,441 - AO356_07510 0.63 +0.2 1,664,441 - AO356_07510 0.63 +0.0 1,664,441 - AO356_07510 0.63 +0.3 1,664,441 - AO356_07510 0.63 +0.9 1,664,441 - AO356_07510 0.63 +0.0 1,664,453 - AO356_07510 0.64 -2.1 1,664,453 - AO356_07510 0.64 -0.2 1,664,756 + AO356_07510 0.82 +1.4 1,664,756 + AO356_07510 0.82 -0.5 1,664,757 - AO356_07510 0.82 -0.2 1,664,757 - AO356_07510 0.82 -1.3 1,664,894 + -1.7 1,664,894 + -0.4 1,664,895 - +0.0 1,665,134 + -0.4 1,665,134 + +1.3 1,665,135 - +1.3 1,665,135 - +0.7 1,665,135 - -1.4 1,666,160 + +1.4 1,666,224 - -1.4 1,666,502 + +0.6 1,666,502 + +1.6 1,666,503 - +2.6 1,666,503 - +2.6 1,666,503 - +2.6 1,666,514 - -1.9 1,666,514 - +0.3 1,666,514 - +1.2
Or see this region's nucleotide sequence