Experiment: P5ss-5 phage 10-1 dilution SM calcl2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_07390 and AO356_07395 are separated by 194 nucleotides AO356_07395 and AO356_07400 are separated by 143 nucleotides AO356_07400 and AO356_07405 are separated by 3 nucleotides AO356_07405 and AO356_07410 are separated by 159 nucleotides
AO356_07390: AO356_07390 - polyribonucleotide nucleotidyltransferase, at 1,636,894 to 1,638,999
_07390
AO356_07395: AO356_07395 - 30S ribosomal protein S15, at 1,639,194 to 1,639,463
_07395
AO356_07400: AO356_07400 - pseudouridine synthase, at 1,639,607 to 1,640,524
_07400
AO356_07405: AO356_07405 - ribosome-binding factor A, at 1,640,528 to 1,640,929
_07405
AO356_07410: AO356_07410 - translation initiation factor IF-2, at 1,641,089 to 1,643,608
_07410
Position (kb) 1639
1640
1641 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1639.756 kb on - strand, within AO356_07400 at 1639.938 kb on + strand, within AO356_07400 at 1639.939 kb on - strand, within AO356_07400 at 1639.990 kb on - strand, within AO356_07400 at 1639.990 kb on - strand, within AO356_07400 at 1639.990 kb on - strand, within AO356_07400 at 1639.990 kb on - strand, within AO356_07400 at 1639.990 kb on - strand, within AO356_07400 at 1640.027 kb on - strand, within AO356_07400 at 1640.027 kb on - strand, within AO356_07400 at 1640.027 kb on - strand, within AO356_07400 at 1640.063 kb on - strand, within AO356_07400 at 1640.066 kb on - strand, within AO356_07400 at 1640.066 kb on - strand, within AO356_07400 at 1640.113 kb on + strand, within AO356_07400 at 1640.113 kb on + strand, within AO356_07400 at 1640.114 kb on - strand, within AO356_07400 at 1640.115 kb on + strand, within AO356_07400 at 1640.115 kb on + strand, within AO356_07400 at 1640.115 kb on + strand, within AO356_07400 at 1640.115 kb on + strand, within AO356_07400 at 1640.116 kb on - strand, within AO356_07400 at 1640.149 kb on - strand, within AO356_07400 at 1640.159 kb on + strand, within AO356_07400 at 1640.498 kb on - strand at 1640.507 kb on - strand at 1640.637 kb on + strand, within AO356_07405 at 1640.938 kb on - strand at 1640.938 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction P5ss-5 phage 10-1 dilution SM calcl2 remove 1,639,756 - AO356_07400 0.16 -1.5 1,639,938 + AO356_07400 0.36 -0.6 1,639,939 - AO356_07400 0.36 +1.0 1,639,990 - AO356_07400 0.42 -1.4 1,639,990 - AO356_07400 0.42 -1.0 1,639,990 - AO356_07400 0.42 -0.6 1,639,990 - AO356_07400 0.42 -1.6 1,639,990 - AO356_07400 0.42 +0.0 1,640,027 - AO356_07400 0.46 -0.2 1,640,027 - AO356_07400 0.46 +0.0 1,640,027 - AO356_07400 0.46 -1.1 1,640,063 - AO356_07400 0.50 +2.6 1,640,066 - AO356_07400 0.50 -0.4 1,640,066 - AO356_07400 0.50 -1.5 1,640,113 + AO356_07400 0.55 -1.7 1,640,113 + AO356_07400 0.55 -2.1 1,640,114 - AO356_07400 0.55 -1.7 1,640,115 + AO356_07400 0.55 -0.2 1,640,115 + AO356_07400 0.55 +1.0 1,640,115 + AO356_07400 0.55 +0.3 1,640,115 + AO356_07400 0.55 +0.7 1,640,116 - AO356_07400 0.55 -1.2 1,640,149 - AO356_07400 0.59 +2.6 1,640,159 + AO356_07400 0.60 -1.1 1,640,498 - +1.0 1,640,507 - -1.4 1,640,637 + AO356_07405 0.27 +1.6 1,640,938 - -0.2 1,640,938 - +1.8
Or see this region's nucleotide sequence