Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00937 and SMc00938 are separated by 84 nucleotides SMc00938 and SMc00957 are separated by 22 nucleotides SMc00957 and SMc00939 are separated by 67 nucleotides SMc00939 and SMc00940 are separated by 205 nucleotides
SMc00937: SMc00937 - TRK system potassium uptake transmembrane protein, at 1,765,694 to 1,767,148
SMc00937
SMc00938: SMc00938 - hypothetical protein, at 1,767,233 to 1,767,823
SMc00938
SMc00957: SMc00957 - tRNA-Leu, at 1,767,846 to 1,767,928
SMc00957
SMc00939: SMc00939 - hypothetical protein, at 1,767,996 to 1,768,385
SMc00939
SMc00940: SMc00940 - hypothetical protein, at 1,768,591 to 1,768,842
SMc00940
Position (kb)
1767
1768 Strain fitness (log2 ratio)
-2
-1
0
1 at 1766.849 kb on - strand, within SMc00937 at 1766.849 kb on - strand, within SMc00937 at 1766.897 kb on + strand, within SMc00937 at 1766.897 kb on + strand, within SMc00937 at 1766.897 kb on + strand, within SMc00937 at 1766.897 kb on + strand, within SMc00937 at 1766.897 kb on + strand, within SMc00937 at 1766.897 kb on + strand, within SMc00937 at 1766.898 kb on - strand, within SMc00937 at 1766.898 kb on - strand, within SMc00937 at 1766.898 kb on - strand, within SMc00937 at 1766.898 kb on - strand, within SMc00937 at 1766.898 kb on - strand, within SMc00937 at 1766.898 kb on - strand, within SMc00937 at 1766.900 kb on - strand, within SMc00937 at 1766.945 kb on + strand, within SMc00937 at 1767.062 kb on + strand at 1767.062 kb on + strand at 1767.147 kb on - strand at 1767.147 kb on - strand at 1767.242 kb on + strand at 1767.242 kb on + strand at 1767.243 kb on - strand at 1767.477 kb on - strand, within SMc00938 at 1767.522 kb on + strand, within SMc00938 at 1767.522 kb on + strand, within SMc00938 at 1767.522 kb on + strand, within SMc00938 at 1767.522 kb on + strand, within SMc00938 at 1767.522 kb on + strand, within SMc00938 at 1767.523 kb on - strand, within SMc00938 at 1767.523 kb on - strand, within SMc00938 at 1767.523 kb on - strand, within SMc00938 at 1767.523 kb on - strand, within SMc00938 at 1767.524 kb on + strand, within SMc00938 at 1767.527 kb on + strand, within SMc00938 at 1767.527 kb on + strand, within SMc00938 at 1767.527 kb on + strand, within SMc00938 at 1767.528 kb on - strand, within SMc00938 at 1767.548 kb on - strand, within SMc00938 at 1767.695 kb on + strand, within SMc00938 at 1767.696 kb on - strand, within SMc00938 at 1767.696 kb on - strand, within SMc00938 at 1767.740 kb on + strand, within SMc00938 at 1767.740 kb on + strand, within SMc00938 at 1767.938 kb on - strand at 1767.938 kb on - strand at 1768.066 kb on + strand, within SMc00939 at 1768.066 kb on + strand, within SMc00939 at 1768.067 kb on - strand, within SMc00939 at 1768.067 kb on - strand, within SMc00939 at 1768.068 kb on + strand, within SMc00939 at 1768.069 kb on - strand, within SMc00939 at 1768.371 kb on + strand at 1768.379 kb on - strand at 1768.379 kb on - strand at 1768.379 kb on - strand at 1768.407 kb on + strand at 1768.408 kb on - strand at 1768.500 kb on + strand at 1768.501 kb on - strand at 1768.501 kb on - strand at 1768.537 kb on + strand at 1768.826 kb on + strand at 1768.827 kb on - strand at 1768.827 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,766,849 - SMc00937 0.79 -2.1 1,766,849 - SMc00937 0.79 -0.6 1,766,897 + SMc00937 0.83 -0.4 1,766,897 + SMc00937 0.83 -2.5 1,766,897 + SMc00937 0.83 -0.9 1,766,897 + SMc00937 0.83 -0.6 1,766,897 + SMc00937 0.83 -0.0 1,766,897 + SMc00937 0.83 -1.5 1,766,898 - SMc00937 0.83 -0.8 1,766,898 - SMc00937 0.83 -0.3 1,766,898 - SMc00937 0.83 -0.3 1,766,898 - SMc00937 0.83 +0.2 1,766,898 - SMc00937 0.83 -0.5 1,766,898 - SMc00937 0.83 +0.4 1,766,900 - SMc00937 0.83 -0.4 1,766,945 + SMc00937 0.86 -1.0 1,767,062 + -0.4 1,767,062 + +0.0 1,767,147 - -0.0 1,767,147 - -0.7 1,767,242 + +0.4 1,767,242 + -0.2 1,767,243 - -0.4 1,767,477 - SMc00938 0.41 -0.6 1,767,522 + SMc00938 0.49 -0.3 1,767,522 + SMc00938 0.49 -0.7 1,767,522 + SMc00938 0.49 -0.1 1,767,522 + SMc00938 0.49 -0.3 1,767,522 + SMc00938 0.49 -1.2 1,767,523 - SMc00938 0.49 +0.4 1,767,523 - SMc00938 0.49 -1.4 1,767,523 - SMc00938 0.49 +0.1 1,767,523 - SMc00938 0.49 -0.1 1,767,524 + SMc00938 0.49 +0.8 1,767,527 + SMc00938 0.50 +0.0 1,767,527 + SMc00938 0.50 -0.2 1,767,527 + SMc00938 0.50 -1.7 1,767,528 - SMc00938 0.50 -0.7 1,767,548 - SMc00938 0.53 -0.2 1,767,695 + SMc00938 0.78 +0.6 1,767,696 - SMc00938 0.78 -0.0 1,767,696 - SMc00938 0.78 -1.5 1,767,740 + SMc00938 0.86 +1.2 1,767,740 + SMc00938 0.86 +0.3 1,767,938 - +1.4 1,767,938 - -0.6 1,768,066 + SMc00939 0.18 -0.3 1,768,066 + SMc00939 0.18 -0.6 1,768,067 - SMc00939 0.18 +0.2 1,768,067 - SMc00939 0.18 -0.0 1,768,068 + SMc00939 0.18 -0.5 1,768,069 - SMc00939 0.19 +0.2 1,768,371 + -0.1 1,768,379 - +0.5 1,768,379 - -0.5 1,768,379 - +0.4 1,768,407 + +0.5 1,768,408 - -1.0 1,768,500 + -1.1 1,768,501 - -0.3 1,768,501 - -0.7 1,768,537 + -0.2 1,768,826 + -0.8 1,768,827 - +0.7 1,768,827 - +0.7
Or see this region's nucleotide sequence