Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0095 and SMa0097 are separated by 16 nucleotides SMa0097 and SMa0101 are separated by 182 nucleotides
SMa0095: SMa0095 - D-aminopeptidase, at 49,084 to 50,121
SMa0095
SMa0097: SMa0097 - LysR family transcriptional regulator, at 50,138 to 51,079
SMa0097
SMa0101: SMa0101 - amidohydrolase, at 51,262 to 52,887
SMa0101
Position (kb)
50
51
52 Strain fitness (log2 ratio)
-2
-1
0
1 at 49.281 kb on + strand, within SMa0095 at 50.007 kb on + strand, within SMa0095 at 50.008 kb on - strand, within SMa0095 at 50.077 kb on + strand at 50.180 kb on + strand at 50.180 kb on + strand at 50.181 kb on - strand at 50.181 kb on - strand at 50.540 kb on + strand, within SMa0097 at 50.540 kb on + strand, within SMa0097 at 50.541 kb on - strand, within SMa0097 at 50.541 kb on - strand, within SMa0097 at 50.541 kb on - strand, within SMa0097 at 50.583 kb on - strand, within SMa0097 at 50.640 kb on + strand, within SMa0097 at 50.640 kb on + strand, within SMa0097 at 50.640 kb on + strand, within SMa0097 at 50.640 kb on + strand, within SMa0097 at 50.788 kb on + strand, within SMa0097 at 50.789 kb on - strand, within SMa0097 at 50.789 kb on - strand, within SMa0097 at 50.853 kb on + strand, within SMa0097 at 50.853 kb on + strand, within SMa0097 at 50.854 kb on - strand, within SMa0097 at 50.854 kb on - strand, within SMa0097 at 51.119 kb on + strand at 51.142 kb on - strand at 51.221 kb on + strand at 51.221 kb on + strand at 51.221 kb on + strand at 51.222 kb on - strand at 51.222 kb on - strand at 51.222 kb on - strand at 51.222 kb on - strand at 51.222 kb on - strand at 51.288 kb on + strand at 51.288 kb on + strand at 51.289 kb on - strand at 51.289 kb on - strand at 51.693 kb on - strand, within SMa0101 at 51.693 kb on - strand, within SMa0101 at 51.718 kb on + strand, within SMa0101 at 51.914 kb on - strand, within SMa0101 at 51.992 kb on - strand, within SMa0101
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 49,281 + SMa0095 0.19 +0.2 50,007 + SMa0095 0.89 +0.4 50,008 - SMa0095 0.89 -0.4 50,077 + +0.1 50,180 + +0.1 50,180 + +1.5 50,181 - -0.5 50,181 - +0.2 50,540 + SMa0097 0.43 -0.6 50,540 + SMa0097 0.43 -0.6 50,541 - SMa0097 0.43 +0.4 50,541 - SMa0097 0.43 +0.8 50,541 - SMa0097 0.43 +0.3 50,583 - SMa0097 0.47 +0.9 50,640 + SMa0097 0.53 +0.3 50,640 + SMa0097 0.53 -1.3 50,640 + SMa0097 0.53 +1.7 50,640 + SMa0097 0.53 +0.3 50,788 + SMa0097 0.69 +0.4 50,789 - SMa0097 0.69 +0.7 50,789 - SMa0097 0.69 -1.1 50,853 + SMa0097 0.76 +0.1 50,853 + SMa0097 0.76 +1.3 50,854 - SMa0097 0.76 +0.1 50,854 - SMa0097 0.76 +0.0 51,119 + -0.5 51,142 - +0.7 51,221 + -0.0 51,221 + +0.1 51,221 + +0.1 51,222 - +1.2 51,222 - -1.9 51,222 - +0.1 51,222 - -0.2 51,222 - +0.3 51,288 + -0.7 51,288 + -0.4 51,289 - +0.3 51,289 - -0.2 51,693 - SMa0101 0.27 -0.4 51,693 - SMa0101 0.27 -0.1 51,718 + SMa0101 0.28 +0.4 51,914 - SMa0101 0.40 -0.3 51,992 - SMa0101 0.45 -0.6
Or see this region's nucleotide sequence