Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21412 and SM_b21413 are separated by 19 nucleotides SM_b21413 and SM_b21414 are separated by 73 nucleotides SM_b21414 and SM_b21415 are separated by 42 nucleotides
SM_b21412: SM_b21412 - hypothetical protein, at 1,341,717 to 1,342,142
_b21412
SM_b21413: SM_b21413 - hypothetical protein, at 1,342,162 to 1,342,728
_b21413
SM_b21414: SM_b21414 - amino acid decarboxylase, at 1,342,802 to 1,344,223
_b21414
SM_b21415: SM_b21415 - oxidoreductase, oxygen dependent, FAD-dependent protein, at 1,344,266 to 1,345,705
_b21415
Position (kb)
1342
1343
1344
1345 Strain fitness (log2 ratio)
-1
0
1 at 1342.002 kb on + strand, within SM_b21412 at 1342.164 kb on - strand at 1342.183 kb on + strand at 1342.183 kb on + strand at 1342.183 kb on + strand at 1342.409 kb on - strand, within SM_b21413 at 1342.803 kb on + strand at 1343.069 kb on + strand, within SM_b21414 at 1343.070 kb on - strand, within SM_b21414 at 1343.070 kb on - strand, within SM_b21414 at 1343.307 kb on - strand, within SM_b21414 at 1343.328 kb on + strand, within SM_b21414 at 1343.329 kb on - strand, within SM_b21414 at 1343.512 kb on + strand, within SM_b21414 at 1343.534 kb on + strand at 1343.535 kb on - strand, within SM_b21414 at 1344.120 kb on + strand at 1344.120 kb on + strand at 1344.125 kb on + strand at 1344.125 kb on + strand at 1344.247 kb on - strand at 1344.424 kb on - strand, within SM_b21415 at 1344.611 kb on + strand, within SM_b21415 at 1344.611 kb on + strand, within SM_b21415 at 1344.728 kb on + strand, within SM_b21415 at 1344.728 kb on + strand, within SM_b21415 at 1344.849 kb on + strand, within SM_b21415 at 1344.849 kb on + strand, within SM_b21415 at 1344.850 kb on - strand, within SM_b21415 at 1344.973 kb on + strand, within SM_b21415 at 1344.973 kb on + strand, within SM_b21415 at 1344.974 kb on - strand, within SM_b21415 at 1344.974 kb on - strand at 1344.976 kb on - strand, within SM_b21415 at 1344.976 kb on - strand, within SM_b21415
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,342,002 + SM_b21412 0.67 +0.3 1,342,164 - -0.1 1,342,183 + +0.6 1,342,183 + -0.5 1,342,183 + -0.3 1,342,409 - SM_b21413 0.44 -0.0 1,342,803 + -0.0 1,343,069 + SM_b21414 0.19 +0.3 1,343,070 - SM_b21414 0.19 +0.1 1,343,070 - SM_b21414 0.19 +0.0 1,343,307 - SM_b21414 0.36 +0.9 1,343,328 + SM_b21414 0.37 +0.5 1,343,329 - SM_b21414 0.37 +0.4 1,343,512 + SM_b21414 0.50 +0.1 1,343,534 + -0.4 1,343,535 - SM_b21414 0.52 +0.8 1,344,120 + -0.1 1,344,120 + -0.1 1,344,125 + -0.2 1,344,125 + -1.1 1,344,247 - -0.4 1,344,424 - SM_b21415 0.11 +1.2 1,344,611 + SM_b21415 0.24 -0.5 1,344,611 + SM_b21415 0.24 +0.5 1,344,728 + SM_b21415 0.32 -0.1 1,344,728 + SM_b21415 0.32 -0.4 1,344,849 + SM_b21415 0.40 +0.2 1,344,849 + SM_b21415 0.40 +0.3 1,344,850 - SM_b21415 0.41 +0.5 1,344,973 + SM_b21415 0.49 +0.6 1,344,973 + SM_b21415 0.49 -0.3 1,344,974 - SM_b21415 0.49 +0.8 1,344,974 - -0.0 1,344,976 - SM_b21415 0.49 -0.2 1,344,976 - SM_b21415 0.49 -0.2
Or see this region's nucleotide sequence