Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21237 and SM_b21238 are separated by 40 nucleotides SM_b21238 and SM_b21239 overlap by 20 nucleotides SM_b21239 and SM_b21240 are separated by 154 nucleotides
SM_b21237: SM_b21237 - sulfotransferase domain-containing protein, at 803,187 to 804,110
_b21237
SM_b21238: SM_b21238 - hypothetical protein, at 804,151 to 804,381
_b21238
SM_b21239: SM_b21239 - pectate lysase, at 804,362 to 805,600
_b21239
SM_b21240: SM_b21240 - MPA1 family protein, at 805,755 to 807,743
_b21240
Position (kb) 804
805
806 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 803.433 kb on + strand, within SM_b21237 at 803.433 kb on + strand, within SM_b21237 at 803.433 kb on + strand, within SM_b21237 at 803.434 kb on - strand, within SM_b21237 at 803.434 kb on - strand, within SM_b21237 at 803.520 kb on + strand, within SM_b21237 at 803.520 kb on + strand, within SM_b21237 at 803.520 kb on + strand, within SM_b21237 at 803.524 kb on + strand, within SM_b21237 at 803.525 kb on - strand, within SM_b21237 at 803.532 kb on - strand, within SM_b21237 at 803.681 kb on - strand, within SM_b21237 at 803.681 kb on - strand, within SM_b21237 at 803.681 kb on - strand, within SM_b21237 at 803.704 kb on - strand at 803.802 kb on + strand, within SM_b21237 at 803.802 kb on + strand, within SM_b21237 at 803.802 kb on + strand, within SM_b21237 at 803.847 kb on + strand, within SM_b21237 at 803.879 kb on + strand, within SM_b21237 at 803.879 kb on + strand, within SM_b21237 at 803.880 kb on - strand, within SM_b21237 at 803.927 kb on + strand at 803.927 kb on + strand, within SM_b21237 at 803.928 kb on - strand, within SM_b21237 at 803.971 kb on + strand, within SM_b21237 at 803.971 kb on + strand, within SM_b21237 at 803.971 kb on + strand, within SM_b21237 at 803.972 kb on - strand, within SM_b21237 at 803.972 kb on - strand, within SM_b21237 at 803.972 kb on - strand, within SM_b21237 at 803.972 kb on - strand, within SM_b21237 at 804.102 kb on + strand at 804.103 kb on - strand at 804.103 kb on - strand at 804.103 kb on - strand at 804.123 kb on + strand at 804.123 kb on + strand at 804.158 kb on + strand at 804.159 kb on - strand at 804.163 kb on + strand at 804.164 kb on - strand at 804.216 kb on - strand, within SM_b21238 at 804.389 kb on + strand at 804.389 kb on + strand at 804.389 kb on + strand at 804.390 kb on - strand at 804.390 kb on - strand at 804.390 kb on - strand at 804.390 kb on - strand at 804.390 kb on - strand at 804.464 kb on - strand at 804.698 kb on + strand, within SM_b21239 at 804.734 kb on - strand, within SM_b21239 at 804.734 kb on - strand, within SM_b21239 at 804.734 kb on - strand, within SM_b21239 at 804.808 kb on + strand, within SM_b21239 at 804.808 kb on + strand, within SM_b21239 at 804.808 kb on + strand, within SM_b21239 at 804.808 kb on + strand, within SM_b21239 at 805.007 kb on + strand, within SM_b21239 at 805.007 kb on + strand, within SM_b21239 at 805.007 kb on + strand, within SM_b21239 at 805.008 kb on - strand, within SM_b21239 at 805.008 kb on - strand, within SM_b21239 at 805.014 kb on + strand, within SM_b21239 at 805.048 kb on + strand, within SM_b21239 at 805.049 kb on - strand, within SM_b21239 at 805.064 kb on + strand, within SM_b21239 at 805.065 kb on - strand, within SM_b21239 at 805.142 kb on + strand, within SM_b21239 at 805.143 kb on - strand, within SM_b21239 at 805.143 kb on - strand, within SM_b21239 at 805.157 kb on + strand at 805.158 kb on - strand, within SM_b21239 at 805.158 kb on - strand, within SM_b21239 at 805.286 kb on + strand, within SM_b21239 at 805.287 kb on - strand, within SM_b21239 at 805.465 kb on + strand, within SM_b21239 at 805.466 kb on - strand, within SM_b21239 at 805.466 kb on - strand, within SM_b21239 at 805.598 kb on + strand at 805.599 kb on - strand at 805.599 kb on - strand at 805.599 kb on - strand at 805.746 kb on + strand at 805.746 kb on + strand at 805.747 kb on - strand at 805.747 kb on - strand at 805.757 kb on - strand at 806.040 kb on + strand, within SM_b21240 at 806.040 kb on + strand, within SM_b21240 at 806.041 kb on - strand, within SM_b21240 at 806.042 kb on + strand, within SM_b21240 at 806.042 kb on + strand, within SM_b21240 at 806.287 kb on + strand, within SM_b21240 at 806.287 kb on + strand, within SM_b21240 at 806.288 kb on - strand, within SM_b21240 at 806.501 kb on + strand, within SM_b21240 at 806.502 kb on - strand, within SM_b21240 at 806.503 kb on + strand, within SM_b21240 at 806.503 kb on + strand, within SM_b21240 at 806.503 kb on + strand, within SM_b21240 at 806.503 kb on + strand, within SM_b21240 at 806.503 kb on + strand, within SM_b21240 at 806.504 kb on - strand, within SM_b21240 at 806.504 kb on - strand, within SM_b21240
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 803,433 + SM_b21237 0.27 +0.3 803,433 + SM_b21237 0.27 -0.1 803,433 + SM_b21237 0.27 -0.8 803,434 - SM_b21237 0.27 -0.1 803,434 - SM_b21237 0.27 +0.9 803,520 + SM_b21237 0.36 +0.3 803,520 + SM_b21237 0.36 +0.0 803,520 + SM_b21237 0.36 +1.0 803,524 + SM_b21237 0.36 +0.7 803,525 - SM_b21237 0.37 +0.1 803,532 - SM_b21237 0.37 +1.6 803,681 - SM_b21237 0.53 +0.4 803,681 - SM_b21237 0.53 +0.3 803,681 - SM_b21237 0.53 -0.1 803,704 - +0.1 803,802 + SM_b21237 0.67 +0.4 803,802 + SM_b21237 0.67 +0.4 803,802 + SM_b21237 0.67 -2.4 803,847 + SM_b21237 0.71 +0.6 803,879 + SM_b21237 0.75 -1.7 803,879 + SM_b21237 0.75 +0.0 803,880 - SM_b21237 0.75 -0.4 803,927 + +1.4 803,927 + SM_b21237 0.80 +0.8 803,928 - SM_b21237 0.80 -0.1 803,971 + SM_b21237 0.85 +0.4 803,971 + SM_b21237 0.85 -0.7 803,971 + SM_b21237 0.85 -0.6 803,972 - SM_b21237 0.85 +0.6 803,972 - SM_b21237 0.85 -0.2 803,972 - SM_b21237 0.85 -0.1 803,972 - SM_b21237 0.85 +0.0 804,102 + +0.2 804,103 - -0.1 804,103 - -0.1 804,103 - -0.7 804,123 + +0.7 804,123 + +0.8 804,158 + +0.3 804,159 - -0.5 804,163 + +0.6 804,164 - -0.6 804,216 - SM_b21238 0.28 -1.9 804,389 + +0.5 804,389 + +0.4 804,389 + -0.1 804,390 - -0.9 804,390 - -0.3 804,390 - -0.4 804,390 - -0.3 804,390 - -0.2 804,464 - -2.1 804,698 + SM_b21239 0.27 +0.5 804,734 - SM_b21239 0.30 -0.2 804,734 - SM_b21239 0.30 +0.4 804,734 - SM_b21239 0.30 +0.7 804,808 + SM_b21239 0.36 +1.2 804,808 + SM_b21239 0.36 -1.9 804,808 + SM_b21239 0.36 +0.5 804,808 + SM_b21239 0.36 +0.3 805,007 + SM_b21239 0.52 -0.1 805,007 + SM_b21239 0.52 +1.0 805,007 + SM_b21239 0.52 -0.7 805,008 - SM_b21239 0.52 -1.2 805,008 - SM_b21239 0.52 +0.8 805,014 + SM_b21239 0.53 +0.1 805,048 + SM_b21239 0.55 +1.1 805,049 - SM_b21239 0.55 -0.6 805,064 + SM_b21239 0.57 +1.0 805,065 - SM_b21239 0.57 +0.3 805,142 + SM_b21239 0.63 +0.2 805,143 - SM_b21239 0.63 +0.4 805,143 - SM_b21239 0.63 +0.4 805,157 + -1.4 805,158 - SM_b21239 0.64 +0.6 805,158 - SM_b21239 0.64 -0.0 805,286 + SM_b21239 0.75 -0.6 805,287 - SM_b21239 0.75 +0.1 805,465 + SM_b21239 0.89 +1.1 805,466 - SM_b21239 0.89 +0.4 805,466 - SM_b21239 0.89 +0.5 805,598 + +0.4 805,599 - +0.2 805,599 - +1.4 805,599 - -0.4 805,746 + -0.0 805,746 + +3.4 805,747 - -0.2 805,747 - +1.4 805,757 - +0.8 806,040 + SM_b21240 0.14 -0.7 806,040 + SM_b21240 0.14 -0.2 806,041 - SM_b21240 0.14 +1.0 806,042 + SM_b21240 0.14 -0.0 806,042 + SM_b21240 0.14 +0.6 806,287 + SM_b21240 0.27 -0.2 806,287 + SM_b21240 0.27 -0.4 806,288 - SM_b21240 0.27 +1.4 806,501 + SM_b21240 0.38 -0.1 806,502 - SM_b21240 0.38 +0.3 806,503 + SM_b21240 0.38 -0.2 806,503 + SM_b21240 0.38 +0.5 806,503 + SM_b21240 0.38 +1.2 806,503 + SM_b21240 0.38 -0.4 806,503 + SM_b21240 0.38 +0.3 806,504 - SM_b21240 0.38 +0.2 806,504 - SM_b21240 0.38 +0.2
Or see this region's nucleotide sequence