Experiment: RCH2_defined_Glucose_noNitrogen in Eppendorf tube with 0.1 mM glass beads, cultured with Sinorhizobium meliloti and Methylobacterium sp. UNC378MF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21195 and BWI76_RS21200 are separated by 76 nucleotides BWI76_RS21200 and BWI76_RS21205 overlap by 1 nucleotides
BWI76_RS21195: BWI76_RS21195 - 3-phenylpropionic acid transporter, at 4,436,891 to 4,438,024
_RS21195
BWI76_RS21200: BWI76_RS21200 - aldose epimerase, at 4,438,101 to 4,438,937
_RS21200
BWI76_RS21205: BWI76_RS21205 - MFS transporter, at 4,438,937 to 4,440,373
_RS21205
Position (kb) 4438
4439 Strain fitness (log2 ratio) -2
-1
0
1 at 4437.147 kb on + strand, within BWI76_RS21195 at 4437.434 kb on - strand, within BWI76_RS21195 at 4437.522 kb on - strand, within BWI76_RS21195 at 4437.539 kb on - strand, within BWI76_RS21195 at 4437.577 kb on + strand, within BWI76_RS21195 at 4437.779 kb on + strand, within BWI76_RS21195 at 4437.927 kb on - strand at 4437.951 kb on + strand at 4437.963 kb on - strand at 4438.392 kb on + strand, within BWI76_RS21200 at 4438.461 kb on + strand, within BWI76_RS21200 at 4438.526 kb on - strand, within BWI76_RS21200 at 4438.526 kb on - strand, within BWI76_RS21200 at 4438.549 kb on - strand, within BWI76_RS21200 at 4438.767 kb on + strand, within BWI76_RS21200 at 4438.979 kb on + strand at 4439.107 kb on + strand, within BWI76_RS21205 at 4439.110 kb on - strand, within BWI76_RS21205 at 4439.247 kb on - strand, within BWI76_RS21205 at 4439.282 kb on + strand, within BWI76_RS21205 at 4439.373 kb on + strand, within BWI76_RS21205 at 4439.405 kb on - strand, within BWI76_RS21205 at 4439.577 kb on + strand, within BWI76_RS21205 at 4439.708 kb on - strand, within BWI76_RS21205 at 4439.923 kb on + strand, within BWI76_RS21205
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_Glucose_noNitrogen in Eppendorf tube with 0.1 mM glass beads, cultured with Sinorhizobium meliloti and Methylobacterium sp. UNC378MF remove 4,437,147 + BWI76_RS21195 0.23 -0.3 4,437,434 - BWI76_RS21195 0.48 +0.5 4,437,522 - BWI76_RS21195 0.56 -0.5 4,437,539 - BWI76_RS21195 0.57 -0.1 4,437,577 + BWI76_RS21195 0.60 +1.0 4,437,779 + BWI76_RS21195 0.78 +0.2 4,437,927 - +1.0 4,437,951 + +0.3 4,437,963 - -0.1 4,438,392 + BWI76_RS21200 0.35 -0.9 4,438,461 + BWI76_RS21200 0.43 -1.1 4,438,526 - BWI76_RS21200 0.51 -1.0 4,438,526 - BWI76_RS21200 0.51 +1.0 4,438,549 - BWI76_RS21200 0.54 -2.2 4,438,767 + BWI76_RS21200 0.80 -0.9 4,438,979 + -0.3 4,439,107 + BWI76_RS21205 0.12 -0.0 4,439,110 - BWI76_RS21205 0.12 +0.3 4,439,247 - BWI76_RS21205 0.22 +0.1 4,439,282 + BWI76_RS21205 0.24 +0.0 4,439,373 + BWI76_RS21205 0.30 -0.6 4,439,405 - BWI76_RS21205 0.33 -0.0 4,439,577 + BWI76_RS21205 0.45 -0.1 4,439,708 - BWI76_RS21205 0.54 -0.3 4,439,923 + BWI76_RS21205 0.69 +0.8
Or see this region's nucleotide sequence