Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0798

Experiment: Pyruvate (fermenting) with Na2S as sulfur source

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDVU0797 and DVU0798 are separated by 59 nucleotidesDVU0798 and DVU0799 are separated by 247 nucleotides DVU0797: DVU0797 - conserved hypothetical protein (TIGR), at 882,546 to 883,976 DVU0797 DVU0798: DVU0798 - hypothetical protein (TIGR), at 884,036 to 884,131 DVU0798 DVU0799: DVU0799 - conserved hypothetical protein (TIGR), at 884,379 to 885,779 DVU0799 Position (kb) 884 885Strain fitness (log2 ratio) -1 0 1at 883.038 kb on + strand, within DVU0797at 883.205 kb on + strand, within DVU0797at 883.311 kb on - strand, within DVU0797at 883.319 kb on + strand, within DVU0797at 883.381 kb on - strand, within DVU0797at 883.533 kb on + strand, within DVU0797at 883.540 kb on - strand, within DVU0797at 883.541 kb on - strand, within DVU0797at 883.607 kb on - strand, within DVU0797at 883.645 kb on - strand, within DVU0797at 883.701 kb on + strand, within DVU0797at 883.716 kb on + strand, within DVU0797at 883.828 kb on + strand, within DVU0797at 884.061 kb on - strand, within DVU0798at 884.120 kb on + strand, within DVU0798at 884.206 kb on - strandat 884.228 kb on - strandat 884.271 kb on + strandat 884.297 kb on - strandat 884.335 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Pyruvate (fermenting) with Na2S as sulfur source
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883,038 + DVU0797 0.34 -0.2
883,205 + DVU0797 0.46 +0.5
883,311 - DVU0797 0.53 -0.2
883,319 + DVU0797 0.54 -0.8
883,381 - DVU0797 0.58 -0.7
883,533 + DVU0797 0.69 -0.3
883,540 - DVU0797 0.69 -0.5
883,541 - DVU0797 0.70 -0.4
883,607 - DVU0797 0.74 +0.1
883,645 - DVU0797 0.77 -1.2
883,701 + DVU0797 0.81 -0.3
883,716 + DVU0797 0.82 -0.2
883,828 + DVU0797 0.90 +0.0
884,061 - DVU0798 0.26 -1.4
884,120 + DVU0798 0.88 -0.4
884,206 - -0.0
884,228 - -0.4
884,271 + +0.7
884,297 - -0.2
884,335 - -0.1

Or see this region's nucleotide sequence