Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03059 and SMc03060 are separated by 558 nucleotides SMc03060 and SMc03061 are separated by 317 nucleotides
SMc03059: SMc03059 - bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase, at 754,910 to 755,809
SMc03059
SMc03060: SMc03060 - transcriptional regulator, at 756,368 to 757,438
SMc03060
SMc03061: SMc03061 - ABC transporter for D-maltose/D-trehalose/sucrose, substrate-binding component (AglE) <small>(from data)</small>, at 757,756 to 759,132
SMc03061
Position (kb) 756
757
758 Strain fitness (log2 ratio) -1
0
1
2 at 755.824 kb on + strand at 755.824 kb on + strand at 755.825 kb on - strand at 755.825 kb on - strand at 755.825 kb on - strand at 755.857 kb on - strand at 755.870 kb on - strand at 755.870 kb on - strand at 756.251 kb on + strand at 756.251 kb on + strand at 756.251 kb on + strand at 756.251 kb on + strand at 756.251 kb on + strand at 756.251 kb on + strand at 756.264 kb on + strand at 756.477 kb on + strand, within SMc03060 at 756.494 kb on + strand, within SMc03060 at 756.495 kb on - strand, within SMc03060 at 756.688 kb on + strand, within SMc03060 at 756.689 kb on - strand, within SMc03060 at 756.944 kb on - strand, within SMc03060 at 756.966 kb on + strand, within SMc03060 at 757.058 kb on - strand, within SMc03060 at 757.058 kb on - strand, within SMc03060 at 757.059 kb on + strand, within SMc03060 at 757.059 kb on + strand, within SMc03060 at 757.060 kb on - strand, within SMc03060 at 757.060 kb on - strand, within SMc03060 at 757.258 kb on - strand, within SMc03060 at 757.514 kb on - strand at 757.984 kb on + strand, within SMc03061 at 757.984 kb on + strand, within SMc03061 at 757.985 kb on - strand, within SMc03061 at 757.990 kb on + strand, within SMc03061 at 758.023 kb on + strand, within SMc03061 at 758.024 kb on - strand, within SMc03061 at 758.041 kb on + strand, within SMc03061 at 758.065 kb on - strand, within SMc03061 at 758.188 kb on + strand, within SMc03061 at 758.188 kb on + strand, within SMc03061 at 758.188 kb on + strand, within SMc03061 at 758.188 kb on + strand, within SMc03061 at 758.188 kb on + strand, within SMc03061 at 758.188 kb on + strand, within SMc03061 at 758.189 kb on - strand, within SMc03061 at 758.189 kb on - strand, within SMc03061 at 758.224 kb on + strand, within SMc03061 at 758.225 kb on - strand, within SMc03061 at 758.225 kb on - strand, within SMc03061 at 758.225 kb on - strand, within SMc03061 at 758.227 kb on - strand, within SMc03061 at 758.254 kb on + strand, within SMc03061 at 758.297 kb on - strand, within SMc03061 at 758.326 kb on + strand, within SMc03061
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 755,824 + -0.7 755,824 + -0.1 755,825 - -0.6 755,825 - -0.7 755,825 - +0.3 755,857 - +0.4 755,870 - -1.3 755,870 - -0.4 756,251 + +0.2 756,251 + +0.3 756,251 + +0.1 756,251 + -0.0 756,251 + -1.3 756,251 + -0.3 756,264 + +0.2 756,477 + SMc03060 0.10 +0.7 756,494 + SMc03060 0.12 +0.4 756,495 - SMc03060 0.12 +1.0 756,688 + SMc03060 0.30 +1.2 756,689 - SMc03060 0.30 +0.9 756,944 - SMc03060 0.54 +0.5 756,966 + SMc03060 0.56 +1.2 757,058 - SMc03060 0.64 +0.5 757,058 - SMc03060 0.64 +1.0 757,059 + SMc03060 0.65 -0.2 757,059 + SMc03060 0.65 +0.4 757,060 - SMc03060 0.65 +1.0 757,060 - SMc03060 0.65 +0.8 757,258 - SMc03060 0.83 -1.0 757,514 - +0.5 757,984 + SMc03061 0.17 -0.3 757,984 + SMc03061 0.17 -0.5 757,985 - SMc03061 0.17 -0.2 757,990 + SMc03061 0.17 -0.2 758,023 + SMc03061 0.19 +0.6 758,024 - SMc03061 0.19 -0.0 758,041 + SMc03061 0.21 -0.1 758,065 - SMc03061 0.22 -0.4 758,188 + SMc03061 0.31 -0.5 758,188 + SMc03061 0.31 -1.2 758,188 + SMc03061 0.31 -0.6 758,188 + SMc03061 0.31 +0.6 758,188 + SMc03061 0.31 +0.1 758,188 + SMc03061 0.31 -0.5 758,189 - SMc03061 0.31 +0.1 758,189 - SMc03061 0.31 +0.2 758,224 + SMc03061 0.34 -0.4 758,225 - SMc03061 0.34 +0.4 758,225 - SMc03061 0.34 -1.0 758,225 - SMc03061 0.34 +0.1 758,227 - SMc03061 0.34 -0.1 758,254 + SMc03061 0.36 +2.4 758,297 - SMc03061 0.39 -0.6 758,326 + SMc03061 0.41 -0.6
Or see this region's nucleotide sequence