Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02174 and SMc02173 are separated by 66 nucleotides SMc02173 and SMc02172 are separated by 4 nucleotides SMc02172 and SMc02171 are separated by 351 nucleotides
SMc02174: SMc02174 - hypothetical protein, at 521,374 to 521,811
SMc02174
SMc02173: SMc02173 - hypothetical protein, at 521,878 to 522,306
SMc02173
SMc02172: SMc02172 - transcriptional regulator, at 522,311 to 523,540
SMc02172
SMc02171: SMc02171 - periplasmic binding ABC transporter protein, at 523,892 to 524,917
SMc02171
Position (kb) 522
523
524 Strain fitness (log2 ratio) -1
0
1
2 at 521.311 kb on + strand at 521.333 kb on + strand at 521.333 kb on + strand at 521.334 kb on - strand at 521.334 kb on - strand at 521.334 kb on - strand at 521.429 kb on + strand, within SMc02174 at 521.430 kb on - strand, within SMc02174 at 521.475 kb on + strand, within SMc02174 at 521.590 kb on + strand at 521.591 kb on - strand, within SMc02174 at 521.885 kb on + strand at 521.885 kb on + strand at 521.885 kb on + strand at 521.885 kb on + strand at 521.885 kb on + strand at 521.886 kb on - strand at 521.918 kb on + strand at 521.973 kb on - strand, within SMc02173 at 522.137 kb on - strand, within SMc02173 at 522.209 kb on + strand, within SMc02173 at 522.292 kb on + strand at 522.293 kb on - strand at 522.313 kb on - strand at 522.597 kb on - strand, within SMc02172 at 522.837 kb on + strand, within SMc02172 at 522.837 kb on + strand, within SMc02172 at 522.838 kb on - strand, within SMc02172 at 522.844 kb on - strand, within SMc02172 at 523.147 kb on - strand, within SMc02172 at 523.147 kb on - strand, within SMc02172 at 523.150 kb on + strand, within SMc02172 at 523.150 kb on + strand, within SMc02172 at 523.150 kb on + strand, within SMc02172 at 523.150 kb on + strand, within SMc02172 at 523.150 kb on + strand, within SMc02172 at 523.150 kb on + strand, within SMc02172 at 523.151 kb on - strand, within SMc02172 at 523.151 kb on - strand, within SMc02172 at 523.151 kb on - strand, within SMc02172 at 523.151 kb on - strand, within SMc02172 at 523.151 kb on - strand, within SMc02172 at 523.370 kb on + strand, within SMc02172 at 523.447 kb on + strand at 523.448 kb on - strand at 523.449 kb on + strand at 523.603 kb on - strand at 523.607 kb on + strand at 523.891 kb on - strand at 524.078 kb on + strand, within SMc02171 at 524.078 kb on + strand, within SMc02171 at 524.079 kb on - strand, within SMc02171 at 524.079 kb on - strand, within SMc02171
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 521,311 + -0.2 521,333 + +1.2 521,333 + -0.2 521,334 - +0.2 521,334 - +0.6 521,334 - +0.4 521,429 + SMc02174 0.13 -0.6 521,430 - SMc02174 0.13 +0.8 521,475 + SMc02174 0.23 -0.3 521,590 + +0.8 521,591 - SMc02174 0.50 +0.2 521,885 + -0.4 521,885 + +0.0 521,885 + +0.4 521,885 + +0.1 521,885 + +1.7 521,886 - -0.2 521,918 + +0.5 521,973 - SMc02173 0.22 -0.5 522,137 - SMc02173 0.60 +0.7 522,209 + SMc02173 0.77 -0.1 522,292 + -0.4 522,293 - +0.8 522,313 - +0.2 522,597 - SMc02172 0.23 +1.2 522,837 + SMc02172 0.43 +2.1 522,837 + SMc02172 0.43 +0.2 522,838 - SMc02172 0.43 +1.3 522,844 - SMc02172 0.43 +2.1 523,147 - SMc02172 0.68 +0.6 523,147 - SMc02172 0.68 +0.3 523,150 + SMc02172 0.68 +0.2 523,150 + SMc02172 0.68 +0.7 523,150 + SMc02172 0.68 +0.6 523,150 + SMc02172 0.68 +1.3 523,150 + SMc02172 0.68 -0.1 523,150 + SMc02172 0.68 +0.8 523,151 - SMc02172 0.68 +0.4 523,151 - SMc02172 0.68 +1.1 523,151 - SMc02172 0.68 +1.2 523,151 - SMc02172 0.68 -0.3 523,151 - SMc02172 0.68 +1.5 523,370 + SMc02172 0.86 +0.6 523,447 + +1.1 523,448 - +0.2 523,449 + +1.5 523,603 - +0.6 523,607 + +2.1 523,891 - -1.0 524,078 + SMc02171 0.18 +1.5 524,078 + SMc02171 0.18 +0.4 524,079 - SMc02171 0.18 +0.3 524,079 - SMc02171 0.18 -0.1
Or see this region's nucleotide sequence