Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1767 and SMa1769 are separated by 316 nucleotides SMa1769 and SMa1770 are separated by 97 nucleotides SMa1770 and SMa1776 are separated by 685 nucleotides
SMa1767: SMa1767 - hypothetical protein, at 1,005,037 to 1,005,204
SMa1767
SMa1769: SMa1769 - hypothetical protein, at 1,005,521 to 1,005,829
SMa1769
SMa1770: SMa1770 - hypothetical protein, at 1,005,927 to 1,006,100
SMa1770
SMa1776: SMa1776 - hypothetical protein, at 1,006,786 to 1,008,156
SMa1776
Position (kb)
1005
1006
1007 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1004.962 kb on + strand at 1005.003 kb on + strand at 1005.224 kb on + strand at 1005.224 kb on + strand at 1005.224 kb on + strand at 1005.224 kb on + strand at 1005.225 kb on - strand at 1005.225 kb on - strand at 1005.225 kb on - strand at 1005.225 kb on - strand at 1005.225 kb on - strand at 1005.225 kb on - strand at 1005.225 kb on - strand at 1005.272 kb on + strand at 1005.374 kb on - strand at 1005.439 kb on + strand at 1005.440 kb on - strand at 1005.842 kb on + strand at 1005.843 kb on - strand at 1005.917 kb on + strand at 1005.917 kb on + strand at 1005.917 kb on + strand at 1005.918 kb on - strand at 1005.918 kb on - strand at 1005.918 kb on - strand at 1006.079 kb on - strand, within SMa1770 at 1006.544 kb on - strand at 1006.680 kb on + strand at 1006.680 kb on + strand at 1006.680 kb on + strand at 1006.681 kb on - strand at 1006.690 kb on + strand at 1006.690 kb on + strand at 1006.696 kb on - strand at 1006.840 kb on + strand at 1006.907 kb on + strand at 1006.921 kb on - strand at 1007.026 kb on + strand, within SMa1776 at 1007.026 kb on + strand, within SMa1776 at 1007.027 kb on - strand, within SMa1776 at 1007.027 kb on - strand, within SMa1776 at 1007.028 kb on + strand, within SMa1776 at 1007.074 kb on + strand, within SMa1776 at 1007.074 kb on + strand, within SMa1776 at 1007.075 kb on - strand, within SMa1776 at 1007.093 kb on + strand, within SMa1776
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,004,962 + -0.4 1,005,003 + -0.4 1,005,224 + +0.3 1,005,224 + +1.2 1,005,224 + +0.2 1,005,224 + +1.3 1,005,225 - -0.5 1,005,225 - +0.2 1,005,225 - +0.7 1,005,225 - -0.0 1,005,225 - +0.4 1,005,225 - +0.6 1,005,225 - +0.1 1,005,272 + +0.2 1,005,374 - +0.2 1,005,439 + +0.7 1,005,440 - -0.6 1,005,842 + -1.0 1,005,843 - +0.4 1,005,917 + +0.3 1,005,917 + +0.2 1,005,917 + +1.6 1,005,918 - -0.0 1,005,918 - +0.1 1,005,918 - +1.2 1,006,079 - SMa1770 0.87 +0.8 1,006,544 - +0.2 1,006,680 + +0.1 1,006,680 + -1.3 1,006,680 + -0.4 1,006,681 - +0.1 1,006,690 + +1.8 1,006,690 + -1.9 1,006,696 - -0.4 1,006,840 + -1.8 1,006,907 + +0.5 1,006,921 - +0.1 1,007,026 + SMa1776 0.18 +0.1 1,007,026 + SMa1776 0.18 +1.1 1,007,027 - SMa1776 0.18 -1.6 1,007,027 - SMa1776 0.18 +1.6 1,007,028 + SMa1776 0.18 -0.4 1,007,074 + SMa1776 0.21 -0.2 1,007,074 + SMa1776 0.21 +1.6 1,007,075 - SMa1776 0.21 +0.4 1,007,093 + SMa1776 0.22 +0.6
Or see this region's nucleotide sequence