Strain Fitness in Sinorhizobium meliloti 1021 around SMc00589
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
1,259,521 | - | SMc00588 | 0.13 | +0.1 | |
1,259,533 | - | SMc00588 | 0.14 | +1.0 | |
1,259,965 | - | SMc00588 | 0.61 | +0.5 | |
1,260,370 | - | +0.0 | |||
1,260,370 | - | +1.4 | |||
1,260,370 | - | -0.8 | |||
1,260,385 | - | +0.1 | |||
1,260,454 | + | -0.1 | |||
1,260,454 | + | -0.5 | |||
1,260,454 | + | -1.2 | |||
1,260,454 | + | -0.8 | |||
1,260,523 | + | +1.9 | |||
1,260,523 | + | -1.8 | |||
1,260,596 | - | SMc00589 | 0.17 | +0.6 | |
1,260,741 | - | SMc00589 | 0.33 | -0.7 | |
1,260,968 | + | SMc00589 | 0.58 | -0.0 | |
1,260,969 | - | SMc00589 | 0.58 | -0.5 | |
1,261,109 | + | SMc00589 | 0.73 | -0.1 | |
1,261,199 | + | SMc00589 | 0.83 | +0.4 | |
1,261,200 | - | SMc00589 | 0.83 | +0.2 | |
1,261,250 | + | SMc00589 | 0.89 | -0.5 | |
1,261,286 | + | -0.4 | |||
1,261,287 | - | +1.2 | |||
1,261,287 | - | +0.8 | |||
1,261,396 | + | +0.3 | |||
1,262,288 | + | SMc00590 | 0.48 | -0.5 | |
1,262,289 | - | SMc00590 | 0.48 | -0.8 |
Or see this region's nucleotide sequence