Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1797 and SMa1798 are separated by 615 nucleotides
SMa1797: SMa1797 - hypothetical protein, at 1,018,587 to 1,018,913
SMa1797
SMa1798: SMa1798 - Kup2 potassium uptake protein, at 1,019,529 to 1,021,430
SMa1798
Position (kb)
1018
1019 Strain fitness (log2 ratio)
-1
0
1
2 at 1017.891 kb on + strand at 1017.961 kb on + strand at 1017.962 kb on - strand at 1017.962 kb on - strand at 1017.963 kb on + strand at 1017.964 kb on - strand at 1017.964 kb on - strand at 1018.004 kb on - strand at 1018.024 kb on + strand at 1018.025 kb on - strand at 1018.025 kb on - strand at 1018.027 kb on + strand at 1018.249 kb on - strand at 1018.345 kb on + strand at 1018.345 kb on + strand at 1018.346 kb on - strand at 1018.346 kb on - strand at 1018.376 kb on + strand at 1018.436 kb on + strand at 1018.448 kb on - strand at 1018.473 kb on + strand at 1018.473 kb on + strand at 1018.474 kb on - strand at 1018.585 kb on - strand at 1018.620 kb on + strand, within SMa1797 at 1018.620 kb on + strand, within SMa1797 at 1018.640 kb on + strand, within SMa1797 at 1018.641 kb on - strand, within SMa1797 at 1018.641 kb on - strand, within SMa1797 at 1018.643 kb on + strand, within SMa1797 at 1018.753 kb on + strand, within SMa1797 at 1018.754 kb on - strand, within SMa1797 at 1018.841 kb on + strand, within SMa1797 at 1018.841 kb on + strand, within SMa1797 at 1018.925 kb on + strand at 1018.925 kb on + strand at 1019.131 kb on - strand at 1019.169 kb on - strand at 1019.190 kb on + strand at 1019.190 kb on + strand at 1019.190 kb on + strand at 1019.191 kb on - strand at 1019.214 kb on + strand at 1019.214 kb on + strand at 1019.214 kb on + strand at 1019.215 kb on - strand at 1019.215 kb on - strand at 1019.382 kb on - strand at 1019.405 kb on - strand at 1019.414 kb on + strand at 1019.528 kb on + strand at 1019.528 kb on + strand at 1019.529 kb on - strand at 1019.529 kb on - strand at 1019.616 kb on + strand at 1019.757 kb on + strand, within SMa1798
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,017,891 + -0.6 1,017,961 + -1.1 1,017,962 - -0.6 1,017,962 - -0.1 1,017,963 + +0.3 1,017,964 - -1.6 1,017,964 - -0.1 1,018,004 - -0.5 1,018,024 + +0.1 1,018,025 - +0.7 1,018,025 - -0.2 1,018,027 + -0.0 1,018,249 - +0.2 1,018,345 + -0.7 1,018,345 + +0.0 1,018,346 - +1.5 1,018,346 - +0.5 1,018,376 + +0.6 1,018,436 + -1.1 1,018,448 - -0.8 1,018,473 + -1.7 1,018,473 + -0.8 1,018,474 - +0.5 1,018,585 - +0.5 1,018,620 + SMa1797 0.10 +0.1 1,018,620 + SMa1797 0.10 +0.9 1,018,640 + SMa1797 0.16 -0.0 1,018,641 - SMa1797 0.17 +0.9 1,018,641 - SMa1797 0.17 +0.3 1,018,643 + SMa1797 0.17 +0.8 1,018,753 + SMa1797 0.51 +2.0 1,018,754 - SMa1797 0.51 +1.2 1,018,841 + SMa1797 0.78 +0.2 1,018,841 + SMa1797 0.78 +0.2 1,018,925 + -0.3 1,018,925 + +0.0 1,019,131 - -0.3 1,019,169 - -0.2 1,019,190 + -1.5 1,019,190 + -0.4 1,019,190 + -0.6 1,019,191 - +1.0 1,019,214 + -0.2 1,019,214 + +0.2 1,019,214 + +0.7 1,019,215 - +0.5 1,019,215 - -0.3 1,019,382 - +0.3 1,019,405 - -0.6 1,019,414 + -0.9 1,019,528 + +0.5 1,019,528 + +0.0 1,019,529 - -0.0 1,019,529 - +0.5 1,019,616 + +0.8 1,019,757 + SMa1798 0.12 +0.0
Or see this region's nucleotide sequence