Strain Fitness in Sinorhizobium meliloti 1021 around SM_b21548

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,080,405	-		SM_b21546	0.63	+0.4
1,080,548	+		SM_b21546	0.76	+0.4
1,080,558	+		SM_b21546	0.76	-0.1
1,080,559	-		SM_b21546	0.77	-0.6
1,080,633	+		SM_b21546	0.83	-0.1
1,080,633	+		SM_b21546	0.83	-0.2
1,080,762	-				+0.8
1,080,762	-				-0.1
1,080,836	+				+0.0
1,080,837	-				+0.0
1,080,887	-				+0.3
1,080,907	+				+0.2
1,080,918	+				+0.4
1,080,939	+				-0.9
1,080,939	+				-0.2
1,080,943	-				-0.3
1,080,946	+				-0.1
1,080,946	+				-0.5
1,080,947	-				+0.7
1,081,026	+		SM_b21547	0.27	-0.3
1,081,027	-		SM_b21547	0.27	-0.5
1,081,266	-		SM_b21547	0.88	-0.5
1,081,271	+		SM_b21547	0.90	-0.3
1,081,271	+		SM_b21547	0.90	-0.1
1,081,272	-				-0.3
1,081,272	-				+0.2
1,081,347	+				-0.2
1,081,394	+				+0.1
1,081,394	+				-0.4
1,081,395	-				+0.0
1,081,436	+				-0.1
1,081,436	+				-0.3
1,081,436	+				+0.2
1,081,436	+				+0.3
1,081,436	+				-0.8
1,081,436	+				+1.1
1,081,436	+				-0.4
1,081,436	+				+1.0
1,081,437	-				-0.4
1,081,437	-				+0.0
1,081,437	-				+0.0
1,081,437	-				+0.1
1,081,607	+				+0.5
1,081,607	+				+0.4
1,081,607	+				+0.3
1,081,607	+				+0.4
1,081,608	-				-1.7
1,081,608	-				+0.4
1,081,608	-				+0.1
1,081,608	-				+0.6
1,081,661	+				+0.9
1,081,661	+				-0.5
1,081,661	+				+0.5
1,081,662	-				-0.7
1,081,662	-				-0.4
1,081,662	-				+0.5
1,081,678	-				+0.3
1,081,750	+				+1.0
1,081,878	-				+0.9
1,081,878	-				-0.1
1,082,045	+				-0.2
1,082,045	+				+0.5
1,082,046	-				-0.0
1,082,066	+		SM_b21548	0.10	+0.9
1,082,067	-		SM_b21548	0.10	-0.9
1,082,141	+		SM_b21548	0.11	-0.9
1,082,142	-		SM_b21548	0.11	-0.7
1,082,151	+		SM_b21548	0.12	-0.6
1,082,287	+		SM_b21548	0.14	+0.4
1,082,288	-		SM_b21548	0.14	-0.1
1,082,334	-		SM_b21548	0.14	+0.6
1,082,413	+		SM_b21548	0.16	+0.5
1,082,461	+		SM_b21548	0.16	+0.3
1,082,461	+		SM_b21548	0.16	-0.1
1,082,462	-		SM_b21548	0.16	-0.1
1,082,462	-		SM_b21548	0.16	+1.3
1,082,810	+		SM_b21548	0.22	+0.2
1,082,810	+		SM_b21548	0.22	+0.0
1,082,810	+		SM_b21548	0.22	-0.2
1,082,810	+		SM_b21548	0.22	+0.5
1,082,810	+		SM_b21548	0.22	-0.0
1,082,811	-		SM_b21548	0.22	-0.6
1,082,951	-		SM_b21548	0.24	+0.0
1,083,065	+		SM_b21548	0.26	-0.1
1,083,230	+		SM_b21548	0.28	+0.3
1,083,231	-		SM_b21548	0.28	+1.0
1,083,240	+		SM_b21548	0.28	-0.0
1,083,240	+		SM_b21548	0.28	-0.3
1,083,241	-		SM_b21548	0.28	+0.8
1,083,449	-		SM_b21548	0.31	+0.2
1,084,039	+		SM_b21548	0.40	+1.7
1,084,040	-		SM_b21548	0.40	-0.2
1,084,040	-		SM_b21548	0.40	-1.1
1,084,040	-		SM_b21548	0.40	+0.1
1,084,040	-		SM_b21548	0.40	-0.3
1,084,301	+		SM_b21548	0.44	-0.7
1,084,356	+		SM_b21548	0.45	+0.4
1,084,515	+		SM_b21548	0.48	-0.4
1,084,516	-		SM_b21548	0.48	+0.3
1,084,741	+		SM_b21548	0.51	+0.6
1,085,217	-		SM_b21548	0.58	-0.8
1,085,217	-		SM_b21548	0.58	+0.3
1,085,225	+		SM_b21548	0.59	+0.2
1,085,225	+		SM_b21548	0.59	+0.5
1,085,700	+		SM_b21548	0.66	-0.2
1,085,701	-		SM_b21548	0.66	-0.1
1,085,864	+		SM_b21548	0.68	-0.3
1,085,865	-		SM_b21548	0.68	-0.8
1,085,924	+		SM_b21548	0.69	+0.5
1,085,925	-		SM_b21548	0.69	+0.2
1,085,925	-		SM_b21548	0.69	-0.2
1,086,164	-		SM_b21548	0.73	+0.4
1,086,284	+		SM_b21548	0.75	+0.0
1,086,284	+		SM_b21548	0.75	-0.2
1,086,284	+		SM_b21548	0.75	+1.8
1,086,285	-		SM_b21548	0.75	-0.2
1,086,285	-		SM_b21548	0.75	-0.8
1,086,286	+		SM_b21548	0.75	+0.6
1,086,287	-		SM_b21548	0.75	+0.1
1,086,287	-		SM_b21548	0.75	-1.6
1,086,331	+		SM_b21548	0.76	+0.2
1,086,340	+		SM_b21548	0.76	-1.0
1,086,341	-		SM_b21548	0.76	-0.2
1,086,421	-		SM_b21548	0.77	-0.3
1,086,470	+		SM_b21548	0.78	-0.2
1,086,471	-		SM_b21548	0.78	-0.1
1,086,471	-		SM_b21548	0.78	-0.3
1,086,573	+		SM_b21548	0.79	-0.0
1,086,573	+		SM_b21548	0.79	+0.4
1,086,574	-		SM_b21548	0.79	+0.3
1,086,953	+		SM_b21548	0.85	+0.8
1,086,953	+		SM_b21548	0.85	+0.8
1,087,175	+		SM_b21548	0.89	-1.3
1,087,175	+		SM_b21548	0.89	+1.3
1,087,175	+		SM_b21548	0.89	+0.3
1,087,175	+		SM_b21548	0.89	-0.5
1,087,175	+		SM_b21548	0.89	-0.7
1,087,176	-		SM_b21548	0.89	+1.1
1,087,176	-		SM_b21548	0.89	+0.3
1,087,176	-		SM_b21548	0.89	-0.1
1,087,176	-		SM_b21548	0.89	-0.4
1,087,176	-		SM_b21548	0.89	-1.0
1,087,242	-		SM_b21548	0.90	+1.1
1,087,301	+				+1.3
1,087,302	-				-0.3
1,087,302	-				+0.1
1,087,302	-				-0.2
1,087,302	-				+0.3
1,087,367	+				-0.2
1,087,367	+				+0.6
1,087,368	-				-0.7
1,087,368	-				-0.7
1,087,368	-				-0.3
1,087,368	-				+1.5
1,087,368	-				+0.0
1,087,377	-				-0.2
1,087,442	+				+0.2
1,087,443	-				+1.3
1,087,443	-				+0.0
1,087,443	-				+0.5
1,087,443	-				-0.3
1,087,472	+				+0.7
1,087,472	+				+0.2
1,087,473	-				-0.3
1,087,475	-				+0.3
1,087,475	-				+0.0
1,087,493	+				-0.1
1,087,493	+				-0.0
1,087,494	-				+1.3
1,087,496	+				+0.9
1,087,496	+				-0.7
1,087,496	+				+0.7
1,087,496	+				-0.2
1,087,497	-				+0.1
1,087,497	-				+0.9
1,087,497	-				-0.7
1,087,530	-				-0.3
1,087,712	-				-0.2
1,087,712	-				-0.4
1,087,720	+				+0.1
1,087,721	-				+1.3
1,087,760	-				-0.3
1,087,760	-				-0.3
1,087,760	-				-1.1
1,087,856	+				-0.3
1,087,857	-				-0.4
1,087,857	-				+0.9
1,087,858	+				+0.9
1,087,859	-				+0.7
1,087,859	-				+0.9
1,087,880	+				-0.1
1,087,880	+				+0.6
1,087,880	+				-0.3
1,087,881	-				-0.3
1,087,881	-				-0.3
1,087,881	-				+0.0
1,088,156	+				-0.1
1,088,157	-				-0.9
1,088,157	-				+0.3
1,088,205	-				-0.9
1,088,314	+		SM_b21549	0.20	+1.0
1,088,314	+		SM_b21549	0.20	+0.2
1,088,314	+		SM_b21549	0.20	-0.8
1,088,314	+		SM_b21549	0.20	+0.3
1,088,314	+		SM_b21549	0.20	+0.4
1,088,315	-		SM_b21549	0.20	+0.3
1,088,317	-		SM_b21549	0.20	+0.3
1,088,342	-		SM_b21549	0.23	-0.2
1,088,399	+		SM_b21549	0.29	-0.2
1,088,525	-		SM_b21549	0.43	-0.6
1,088,572	+		SM_b21549	0.48	+0.1
1,088,573	-		SM_b21549	0.48	+0.0
1,088,610	-		SM_b21549	0.52	-0.9
1,088,610	-		SM_b21549	0.52	+0.1