Experiment: KB with Diallyl sulfide 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0692 and Psyr_0693 overlap by 4 nucleotides Psyr_0693 and Psyr_0694 overlap by 7 nucleotides Psyr_0694 and Psyr_0695 overlap by 4 nucleotides
Psyr_0692: Psyr_0692 - Binding-protein-dependent transport systems inner membrane component, at 797,032 to 797,799
_0692
Psyr_0693: Psyr_0693 - Binding-protein-dependent transport systems inner membrane component, at 797,796 to 798,623
_0693
Psyr_0694: Psyr_0694 - ABC transporter, at 798,617 to 799,414
_0694
Psyr_0695: Psyr_0695 - extracellular solute-binding protein, family 3, at 799,411 to 800,262
_0695
Position (kb) 798
799
800 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 797.733 kb on - strand at 797.733 kb on - strand at 797.733 kb on - strand at 797.733 kb on - strand at 797.733 kb on - strand at 797.995 kb on + strand, within Psyr_0693 at 797.995 kb on + strand, within Psyr_0693 at 797.995 kb on + strand, within Psyr_0693 at 797.995 kb on + strand, within Psyr_0693 at 797.996 kb on - strand, within Psyr_0693 at 797.996 kb on - strand, within Psyr_0693 at 797.996 kb on - strand, within Psyr_0693 at 798.118 kb on + strand, within Psyr_0693 at 798.119 kb on - strand, within Psyr_0693 at 798.119 kb on - strand, within Psyr_0693 at 798.119 kb on - strand, within Psyr_0693 at 798.142 kb on + strand, within Psyr_0693 at 798.142 kb on + strand, within Psyr_0693 at 798.142 kb on + strand, within Psyr_0693 at 798.142 kb on + strand, within Psyr_0693 at 798.142 kb on + strand, within Psyr_0693 at 798.142 kb on + strand, within Psyr_0693 at 798.142 kb on + strand, within Psyr_0693 at 798.142 kb on + strand, within Psyr_0693 at 798.142 kb on + strand, within Psyr_0693 at 798.143 kb on - strand, within Psyr_0693 at 798.143 kb on - strand, within Psyr_0693 at 798.143 kb on - strand, within Psyr_0693 at 798.143 kb on - strand, within Psyr_0693 at 798.143 kb on - strand, within Psyr_0693 at 798.143 kb on - strand, within Psyr_0693 at 798.143 kb on - strand, within Psyr_0693 at 798.375 kb on + strand, within Psyr_0693 at 798.376 kb on - strand, within Psyr_0693 at 798.510 kb on + strand, within Psyr_0693 at 798.687 kb on + strand at 798.687 kb on + strand at 798.687 kb on + strand at 798.688 kb on - strand at 798.688 kb on - strand at 798.688 kb on - strand at 798.930 kb on + strand, within Psyr_0694 at 798.930 kb on + strand, within Psyr_0694 at 798.930 kb on + strand, within Psyr_0694 at 798.931 kb on - strand, within Psyr_0694 at 798.931 kb on - strand, within Psyr_0694 at 798.931 kb on - strand, within Psyr_0694 at 798.931 kb on - strand, within Psyr_0694 at 799.457 kb on + strand at 799.457 kb on + strand at 799.457 kb on + strand at 799.457 kb on + strand at 799.457 kb on + strand at 799.457 kb on + strand at 799.457 kb on + strand at 799.458 kb on - strand at 799.458 kb on - strand at 799.458 kb on - strand at 799.595 kb on - strand, within Psyr_0695 at 799.616 kb on + strand, within Psyr_0695 at 799.617 kb on - strand, within Psyr_0695 at 799.817 kb on + strand, within Psyr_0695 at 799.817 kb on + strand, within Psyr_0695 at 799.817 kb on + strand, within Psyr_0695 at 799.817 kb on + strand, within Psyr_0695 at 799.818 kb on - strand, within Psyr_0695 at 799.818 kb on - strand, within Psyr_0695 at 799.955 kb on - strand, within Psyr_0695 at 799.955 kb on - strand, within Psyr_0695 at 800.001 kb on + strand, within Psyr_0695 at 800.002 kb on - strand, within Psyr_0695 at 800.114 kb on + strand, within Psyr_0695 at 800.250 kb on + strand at 800.360 kb on + strand at 800.360 kb on + strand at 800.361 kb on - strand at 800.361 kb on - strand at 800.362 kb on + strand at 800.362 kb on + strand at 800.362 kb on + strand at 800.362 kb on + strand at 800.362 kb on + strand at 800.362 kb on + strand at 800.362 kb on + strand at 800.363 kb on - strand at 800.363 kb on - strand at 800.363 kb on - strand at 800.363 kb on - strand at 800.363 kb on - strand at 800.363 kb on - strand at 800.363 kb on - strand at 800.363 kb on - strand at 800.363 kb on - strand at 800.363 kb on - strand at 800.363 kb on - strand at 800.363 kb on - strand at 800.363 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Diallyl sulfide 10 mM remove 797,733 - -0.5 797,733 - -0.4 797,733 - +0.5 797,733 - +0.7 797,733 - +0.0 797,995 + Psyr_0693 0.24 +0.4 797,995 + Psyr_0693 0.24 -0.3 797,995 + Psyr_0693 0.24 -0.4 797,995 + Psyr_0693 0.24 +0.1 797,996 - Psyr_0693 0.24 -1.3 797,996 - Psyr_0693 0.24 -0.7 797,996 - Psyr_0693 0.24 -0.1 798,118 + Psyr_0693 0.39 +0.9 798,119 - Psyr_0693 0.39 -0.2 798,119 - Psyr_0693 0.39 -0.2 798,119 - Psyr_0693 0.39 -0.4 798,142 + Psyr_0693 0.42 -0.5 798,142 + Psyr_0693 0.42 -0.5 798,142 + Psyr_0693 0.42 +0.6 798,142 + Psyr_0693 0.42 +2.3 798,142 + Psyr_0693 0.42 +0.3 798,142 + Psyr_0693 0.42 +0.2 798,142 + Psyr_0693 0.42 +0.7 798,142 + Psyr_0693 0.42 -1.2 798,142 + Psyr_0693 0.42 +1.1 798,143 - Psyr_0693 0.42 -0.6 798,143 - Psyr_0693 0.42 -1.6 798,143 - Psyr_0693 0.42 +1.2 798,143 - Psyr_0693 0.42 +1.0 798,143 - Psyr_0693 0.42 +0.2 798,143 - Psyr_0693 0.42 +0.2 798,143 - Psyr_0693 0.42 -1.4 798,375 + Psyr_0693 0.70 -0.2 798,376 - Psyr_0693 0.70 -1.0 798,510 + Psyr_0693 0.86 +0.4 798,687 + -0.0 798,687 + +3.2 798,687 + +1.6 798,688 - -1.3 798,688 - -0.4 798,688 - -0.7 798,930 + Psyr_0694 0.39 +0.2 798,930 + Psyr_0694 0.39 -0.3 798,930 + Psyr_0694 0.39 -1.6 798,931 - Psyr_0694 0.39 -1.6 798,931 - Psyr_0694 0.39 -0.3 798,931 - Psyr_0694 0.39 -0.5 798,931 - Psyr_0694 0.39 -0.4 799,457 + -0.0 799,457 + -1.2 799,457 + +1.1 799,457 + -0.2 799,457 + -0.9 799,457 + +0.4 799,457 + -1.1 799,458 - -2.7 799,458 - -0.8 799,458 - -0.3 799,595 - Psyr_0695 0.22 -0.3 799,616 + Psyr_0695 0.24 -0.2 799,617 - Psyr_0695 0.24 -0.0 799,817 + Psyr_0695 0.48 -2.0 799,817 + Psyr_0695 0.48 +0.2 799,817 + Psyr_0695 0.48 +1.3 799,817 + Psyr_0695 0.48 -1.6 799,818 - Psyr_0695 0.48 -0.4 799,818 - Psyr_0695 0.48 -0.2 799,955 - Psyr_0695 0.64 -1.4 799,955 - Psyr_0695 0.64 -1.3 800,001 + Psyr_0695 0.69 -0.4 800,002 - Psyr_0695 0.69 +0.2 800,114 + Psyr_0695 0.83 -0.4 800,250 + -0.4 800,360 + -0.9 800,360 + -0.1 800,361 - +1.4 800,361 - +0.6 800,362 + +0.7 800,362 + -1.2 800,362 + -0.2 800,362 + -0.3 800,362 + +0.2 800,362 + -0.1 800,362 + -1.0 800,363 - +0.8 800,363 - -0.6 800,363 - -0.3 800,363 - -0.4 800,363 - +0.1 800,363 - +0.4 800,363 - -1.2 800,363 - -0.9 800,363 - -0.7 800,363 - -0.6 800,363 - -0.3 800,363 - -0.2 800,363 - -0.4
Or see this region's nucleotide sequence