Experiment: RCH2_defined_Glucose_noNitrogen in Eppendorf tube with sand, cultured with Sinorhizobium meliloti and Methylobacterium sp. UNC378MF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14745 and BWI76_RS14750 are separated by 126 nucleotides BWI76_RS14750 and BWI76_RS14755 are separated by 14 nucleotides BWI76_RS14755 and BWI76_RS14760 are separated by 16 nucleotides
BWI76_RS14745: BWI76_RS14745 - NAD-dependent epimerase/dehydratase, at 3,094,002 to 3,095,057
_RS14745
BWI76_RS14750: BWI76_RS14750 - transcriptional regulator, at 3,095,184 to 3,095,939
_RS14750
BWI76_RS14755: BWI76_RS14755 - SIS domain-containing protein, at 3,095,954 to 3,096,694
_RS14755
BWI76_RS14760: BWI76_RS14760 - PTS ascorbate transporter subunit IIC, at 3,096,711 to 3,098,021
_RS14760
Position (kb)
3095
3096
3097 Strain fitness (log2 ratio)
-2
-1
0
1 at 3095.677 kb on - strand, within BWI76_RS14750 at 3095.740 kb on + strand, within BWI76_RS14750 at 3095.748 kb on - strand, within BWI76_RS14750 at 3095.750 kb on + strand, within BWI76_RS14750 at 3095.773 kb on - strand, within BWI76_RS14750 at 3095.778 kb on - strand, within BWI76_RS14750 at 3095.905 kb on - strand at 3096.093 kb on - strand, within BWI76_RS14755 at 3096.210 kb on + strand, within BWI76_RS14755 at 3096.482 kb on - strand, within BWI76_RS14755 at 3096.482 kb on - strand, within BWI76_RS14755 at 3096.647 kb on - strand at 3096.859 kb on - strand, within BWI76_RS14760 at 3097.093 kb on - strand, within BWI76_RS14760 at 3097.141 kb on - strand, within BWI76_RS14760 at 3097.387 kb on - strand, within BWI76_RS14760 at 3097.568 kb on - strand, within BWI76_RS14760 at 3097.595 kb on + strand, within BWI76_RS14760
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_Glucose_noNitrogen in Eppendorf tube with sand, cultured with Sinorhizobium meliloti and Methylobacterium sp. UNC378MF remove 3,095,677 - BWI76_RS14750 0.65 +0.0 3,095,740 + BWI76_RS14750 0.74 +0.4 3,095,748 - BWI76_RS14750 0.75 -0.3 3,095,750 + BWI76_RS14750 0.75 +0.0 3,095,773 - BWI76_RS14750 0.78 -0.5 3,095,778 - BWI76_RS14750 0.79 +0.3 3,095,905 - +0.3 3,096,093 - BWI76_RS14755 0.19 +0.2 3,096,210 + BWI76_RS14755 0.35 -0.7 3,096,482 - BWI76_RS14755 0.71 -1.8 3,096,482 - BWI76_RS14755 0.71 -0.0 3,096,647 - -0.3 3,096,859 - BWI76_RS14760 0.11 +0.2 3,097,093 - BWI76_RS14760 0.29 +0.4 3,097,141 - BWI76_RS14760 0.33 +1.0 3,097,387 - BWI76_RS14760 0.52 +0.4 3,097,568 - BWI76_RS14760 0.65 +0.6 3,097,595 + BWI76_RS14760 0.67 +0.7
Or see this region's nucleotide sequence