Strain Fitness in Sinorhizobium meliloti 1021 around SMc04205

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,189,728	+		SMc04204	0.53	+0.1
2,189,826	+		SMc04204	0.62	-0.1
2,189,843	+		SMc04204	0.64	-1.1
2,189,844	-		SMc04204	0.64	+0.0
2,189,844	-		SMc04204	0.64	-0.1
2,189,952	+		SMc04204	0.74	+0.2
2,189,952	+		SMc04204	0.74	+1.4
2,189,952	+		SMc04204	0.74	-0.5
2,189,952	+		SMc04204	0.74	+0.7
2,189,952	+		SMc04204	0.74	+0.1
2,189,983	-		SMc04204	0.77	+0.6
2,190,110	+		SMc04204	0.89	-2.1
2,190,122	-				-0.8
2,190,122	-				+0.1
2,190,122	-				+1.1
2,190,122	-				+0.3
2,190,169	+				+1.1
2,190,170	-				-0.9
2,190,291	-				-0.5
2,190,395	+				-1.1
2,190,395	+				+1.1
2,190,395	+				-0.5
2,190,395	+				+0.4
2,190,395	+				-0.6
2,190,414	+				-0.8
2,190,415	-				+0.8
2,190,415	-				+0.8
2,190,415	-				-1.5
2,190,415	-				+0.6
2,190,415	-				-1.5
2,190,415	-				-0.3
2,190,415	-				-0.1
2,190,419	-				+0.6
2,190,689	+		SMc04205	0.13	-0.8
2,190,690	-		SMc04205	0.13	+0.2
2,191,094	+		SMc04205	0.28	-0.0
2,191,094	+		SMc04205	0.28	-1.7
2,191,095	-		SMc04205	0.28	+0.1
2,191,216	-		SMc04205	0.33	-0.8
2,191,272	-		SMc04205	0.35	+1.4
2,191,274	+		SMc04205	0.35	-0.1
2,191,274	+		SMc04205	0.35	-1.6
2,191,275	-		SMc04205	0.35	-0.6
2,191,275	-		SMc04205	0.35	-1.6
2,191,275	-		SMc04205	0.35	-0.3
2,191,361	+		SMc04205	0.38	-0.7
2,191,361	+		SMc04205	0.38	-0.3
2,191,362	-		SMc04205	0.38	+0.1
2,191,362	-		SMc04205	0.38	+0.5
2,191,539	+		SMc04205	0.45	+0.3
2,191,586	+		SMc04205	0.47	-0.8
2,191,587	-		SMc04205	0.47	-0.8
2,191,587	-		SMc04205	0.47	+0.2
2,191,697	+		SMc04205	0.51	-0.6
2,191,698	-		SMc04205	0.51	-0.6
2,191,722	-		SMc04205	0.52	+0.5
2,191,722	-		SMc04205	0.52	+0.2
2,191,757	-		SMc04205	0.53	-1.3
2,191,757	-		SMc04205	0.53	+0.2
2,191,757	-		SMc04205	0.53	-0.3
2,191,815	-		SMc04205	0.55	-2.2
2,191,883	+		SMc04205	0.58	-0.5
2,191,884	-		SMc04205	0.58	-0.2
2,191,884	-		SMc04205	0.58	-0.3
2,191,884	-		SMc04205	0.58	-0.4
2,191,985	+		SMc04205	0.62	+0.4
2,192,039	+		SMc04205	0.64	-0.9
2,192,093	+		SMc04205	0.66	+0.0
2,192,094	-		SMc04205	0.66	+0.2
2,192,097	-		SMc04205	0.66	+0.1
2,192,227	+		SMc04205	0.71	-0.1
2,192,227	+		SMc04205	0.71	+0.2
2,192,228	-		SMc04205	0.71	+0.1
2,192,228	-		SMc04205	0.71	+0.5
2,192,231	+		SMc04205	0.71	+0.5
2,192,239	+		SMc04205	0.71	-0.0
2,192,239	+		SMc04205	0.71	-0.4
2,192,239	+		SMc04205	0.71	-0.5
2,192,239	+		SMc04205	0.71	+0.5
2,192,239	+		SMc04205	0.71	-1.0
2,192,240	-		SMc04205	0.71	+0.2
2,192,240	-		SMc04205	0.71	-0.4
2,192,243	+		SMc04205	0.71	-1.6
2,192,243	+		SMc04205	0.71	+0.3
2,192,309	+		SMc04205	0.74	-1.5
2,192,309	+		SMc04205	0.74	-0.5
2,192,309	+		SMc04205	0.74	-0.9
2,192,309	+		SMc04205	0.74	-0.5
2,192,309	+		SMc04205	0.74	-0.6
2,192,310	-		SMc04205	0.74	+0.0
2,192,325	-		SMc04205	0.74	+0.2
2,192,448	-		SMc04205	0.79	-0.2
2,192,448	-		SMc04205	0.79	-0.2
2,192,448	-		SMc04205	0.79	-0.4
2,192,449	+		SMc04205	0.79	-0.2
2,192,449	+		SMc04205	0.79	+1.0
2,192,450	-		SMc04205	0.79	-1.1
2,192,450	-		SMc04205	0.79	+0.0
2,192,450	-		SMc04205	0.79	-0.2
2,192,450	-		SMc04205	0.79	-0.3
2,192,468	+		SMc04205	0.80	-0.2
2,192,469	-		SMc04205	0.80	+0.8
2,192,555	+		SMc04205	0.83	+0.1
2,192,555	+		SMc04205	0.83	-0.5
2,192,556	-		SMc04205	0.83	-0.0
2,192,556	-		SMc04205	0.83	-1.0
2,192,573	+		SMc04205	0.84	-0.1
2,192,573	+		SMc04205	0.84	+0.1
2,192,574	-		SMc04205	0.84	+0.6
2,192,588	+		SMc04205	0.84	+0.8
2,192,588	+		SMc04205	0.84	+0.2
2,192,588	+		SMc04205	0.84	-0.7
2,192,589	-		SMc04205	0.84	-0.8
2,192,589	-		SMc04205	0.84	+0.1
2,192,589	-		SMc04205	0.84	+0.0
2,192,589	-		SMc04205	0.84	+0.5
2,192,590	+		SMc04205	0.84	-0.2
2,192,590	+		SMc04205	0.84	+0.7
2,192,590	+		SMc04205	0.84	-0.6
2,192,590	+		SMc04205	0.84	-0.7
2,192,590	+		SMc04205	0.84	-2.0
2,192,591	-		SMc04205	0.84	-0.0
2,192,591	-		SMc04205	0.84	-0.2
2,192,591	-		SMc04205	0.84	-0.0
2,192,595	-		SMc04205	0.85	+0.5
2,192,621	+		SMc04205	0.86	+0.7
2,192,621	+		SMc04205	0.86	-1.3
2,192,622	-		SMc04205	0.86	-0.5
2,192,622	-		SMc04205	0.86	-0.9
2,192,622	-		SMc04205	0.86	+0.3
2,192,622	-		SMc04205	0.86	+0.0
2,192,622	-		SMc04205	0.86	-0.0
2,192,622	-		SMc04205	0.86	-0.2
2,192,627	+		SMc04205	0.86	-0.7
2,192,628	-		SMc04205	0.86	-2.3
2,192,628	-		SMc04205	0.86	-1.2
2,192,781	-				-0.1
2,192,781	-				-0.5
2,192,781	-				+0.5
2,192,781	-				-0.2
2,192,841	-				-0.6
2,192,847	+				-0.3
2,192,847	+				+0.5
2,192,848	-				-0.0
2,192,854	+				+0.1
2,192,858	+				-0.7
2,192,858	+				-0.3
2,192,859	-				-1.0
2,192,859	-				-1.0
2,192,859	-				-0.7
2,192,868	-				-1.0
2,192,915	-				-0.8
2,192,927	+				+0.2
2,192,927	+				-0.6
2,192,927	+				-1.0
2,192,927	+				-0.9
2,192,927	+				-0.9
2,192,928	-				+1.9
2,192,928	-				-1.0
2,192,928	-				-0.5
2,192,928	-				-0.9
2,192,951	+				-1.1
2,192,951	+				-0.8
2,192,952	-				-0.5
2,192,952	-				-0.9
2,192,952	-				-0.9
2,192,952	-				-0.2
2,192,952	-				-1.7
2,193,002	+				-0.4
2,193,002	+				-0.3
2,193,003	-				-0.2
2,193,242	-				+1.8
2,193,257	+				-0.1
2,193,257	+				-1.2
2,193,257	+				-1.7
2,193,258	-				-0.6
2,193,415	+				+0.5
2,193,416	-				-0.0
2,193,416	-				-0.2
2,193,416	-				-0.8
2,193,420	+				-1.5
2,193,421	-				-0.2
2,193,421	-				-0.3
2,193,485	-		SMc04206	0.13	-0.4
2,193,485	-		SMc04206	0.13	+0.5
2,193,485	-		SMc04206	0.13	+0.5
2,193,485	-		SMc04206	0.13	+0.5
2,193,557	-		SMc04206	0.22	+0.1
2,193,557	-		SMc04206	0.22	-0.4
2,193,557	-		SMc04206	0.22	+0.8
2,193,557	-		SMc04206	0.22	+0.1
2,193,558	+		SMc04206	0.22	+0.5
2,193,558	+		SMc04206	0.22	-2.8
2,193,558	+		SMc04206	0.22	+0.9
2,193,559	-		SMc04206	0.22	-0.4
2,193,699	+		SMc04206	0.40	-0.2
2,193,712	+		SMc04206	0.42	-0.9
2,193,712	+		SMc04206	0.42	+0.0
2,193,844	-		SMc04206	0.58	+0.2
2,193,866	-		SMc04206	0.61	-0.3
2,193,984	+		SMc04206	0.76	+1.0