Strain Fitness in Sinorhizobium meliloti 1021 around SMc00995
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
1,519,738 | + | SMc01256 | 0.38 | +2.1 | |
1,519,739 | - | SMc01256 | 0.38 | -0.7 | |
1,519,749 | + | SMc01256 | 0.38 | +1.1 | |
1,519,749 | + | SMc01256 | 0.38 | +0.6 | |
1,520,047 | - | SMc01256 | 0.60 | -0.1 | |
1,520,143 | - | SMc01256 | 0.66 | +0.1 | |
1,520,145 | + | SMc01256 | 0.67 | -0.1 | |
1,520,146 | - | SMc01256 | 0.67 | +0.1 | |
1,520,146 | - | SMc01256 | 0.67 | +0.3 | |
1,520,519 | + | -0.7 | |||
1,520,520 | - | -0.0 | |||
1,520,520 | - | +0.3 | |||
1,520,520 | - | -1.1 | |||
1,520,520 | - | -0.1 | |||
1,520,563 | - | +0.5 | |||
1,520,842 | + | SMc00995 | 0.33 | -0.7 | |
1,520,842 | + | SMc00995 | 0.33 | +0.2 | |
1,520,843 | - | SMc00995 | 0.33 | +1.2 | |
1,520,891 | + | SMc00995 | 0.44 | -0.1 | |
1,521,029 | + | SMc00995 | 0.76 | +0.2 | |
1,521,129 | + | -0.7 | |||
1,521,129 | + | +0.6 | |||
1,521,130 | - | +0.2 | |||
1,521,227 | - | +2.1 | |||
1,521,227 | - | -0.6 | |||
1,521,227 | - | +0.3 | |||
1,521,227 | - | +0.3 | |||
1,521,227 | - | +0.1 | |||
1,521,607 | + | -0.5 | |||
1,521,607 | + | +0.2 | |||
1,521,607 | + | +0.5 | |||
1,521,790 | - | +0.1 | |||
1,521,790 | - | +1.1 | |||
1,521,807 | - | +0.4 | |||
1,522,087 | - | -0.7 |
Or see this region's nucleotide sequence